Use gene expression to predict phenotype sample information
☆19Feb 13, 2018Updated 8 years ago
Alternatives and similar repositories for phenopredict
Users that are interested in phenopredict are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Mar 31, 2026Updated 4 months ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data.☆44Mar 3, 2017Updated 9 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. Please download the R package from the RaceID3…☆15Dec 7, 2018Updated 7 years ago
- Analysis examples based on the ISB-CGC hosted TCGA data, using R and R Markdown.☆31Nov 27, 2017Updated 8 years ago
- SeqOthello supports fast coverage query and containment query.☆12May 8, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- GWAS SNP Regulatory Analysis Tool☆17Mar 19, 2015Updated 11 years ago
- A server for maintaining high-throughput sequencing QC data☆13Aug 5, 2025Updated last year
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- Virtual Pharmacist is a web tool that interprets personal genome for the impact of genetic variation on drug response. It can take varian…☆13Nov 16, 2015Updated 10 years ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 6 years ago
- From IDAT to beta.☆25Jul 13, 2018Updated 8 years ago
- synchronize your wordpress or github to hugo website automaticlly☆15Nov 2, 2021Updated 4 years ago
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Jul 3, 2012Updated 14 years ago
- Annotation and Prediction of Oncogenic Gene Fusions in RNAseq☆12Feb 20, 2016Updated 10 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A light weight shiny based web app to access TCGA data☆15Apr 29, 2015Updated 11 years ago
- Source code for ScanGEO Shiny App☆15Apr 18, 2022Updated 4 years ago
- ☆13May 16, 2016Updated 10 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- A graduate-level elective course: Python Programming for Life Science Students☆10Mar 26, 2026Updated 4 months ago
- Download, integration and visualizations of the variety & volume of TCGA data.☆51Oct 28, 2022Updated 3 years ago
- ☆10Feb 25, 2024Updated 2 years ago
- Scripts to recreate figures from the SC3 paper☆41Mar 1, 2017Updated 9 years ago
- Code and data related to the meta-analysis of fat distribution in UK Biobank and GIANT☆23Dec 5, 2018Updated 7 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Browser for ExAC consortium data☆106Jan 21, 2022Updated 4 years ago
- 软件方面的包 (包括各种芯片数据处理，NGS数据处理，差异分析等等！)☆14Apr 23, 2016Updated 10 years ago
- Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis☆18Mar 18, 2025Updated last year
- An R package for inferring the subclonal architecture of tumors☆124Mar 15, 2026Updated 4 months ago
- Repository☆10Oct 23, 2024Updated last year
- wgs_pipeline☆18Dec 3, 2013Updated 12 years ago
- R package for the inference of cell fate bias from single-cell RNA-seq data.☆23Jun 14, 2022Updated 4 years ago
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- ☆19Mar 6, 2019Updated 7 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.☆32May 31, 2016Updated 10 years ago
- Code to reproduce analyses in Nasser, Bergman, Fulco, Guckelberger, Doughty et al Nature 2021☆18Apr 8, 2021Updated 5 years ago
- An open-source R package for omics data integrative analysis in terms of network, evolution and ontology☆18Jan 4, 2024Updated 2 years ago
- Calculate AUC based on GWAS summary statistics only☆10Jun 29, 2018Updated 8 years ago
- a peak-calling and differential analysis tool for replicated ChIP-Seq data☆37May 18, 2022Updated 4 years ago
- Git使用手册☆18Mar 10, 2019Updated 7 years ago
- EpiGenome Gateway - WashU EpiGenome Browser☆21Oct 11, 2021Updated 4 years ago