viragbioinfo / IMMREP_2022_TCRSpecificityLinks
☆21Updated 3 years ago
Alternatives and similar repositories for IMMREP_2022_TCRSpecificity
Users that are interested in IMMREP_2022_TCRSpecificity are comparing it to the libraries listed below
Sorting:
- ☆52Updated 2 years ago
- STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…☆28Updated 8 months ago
- python tools for TCR:peptide-MHC modeling and analysis☆84Updated last year
- Large language modeling applied to T-cell receptor (TCR) sequences.☆57Updated 3 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆74Updated 2 years ago
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆34Updated 3 years ago
- ☆83Updated 2 years ago
- ☆91Updated last year
- Predicting immunogenic peptide recognized by TCR through ensemble deep learning☆17Updated last year
- Generic TCR-epitope recognition prediction using CNN approach on both known and novel epitopes☆17Updated 2 years ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆58Updated last week
- The code for UniPMT☆18Updated 9 months ago
- ☆37Updated 2 years ago
- 📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential☆24Updated 2 months ago
- ☆45Updated 9 months ago
- Code for "T Cell Receptor Specificity Prediction with Bimodal Attention Networks" (https://doi.org/10.1093/bioinformatics/btab294, ISMB 2…☆30Updated 5 months ago
- ☆48Updated 4 years ago
- A visualization software for antibody multi sequence alignment☆22Updated last year
- ☆17Updated 4 years ago
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆42Updated last year
- MaveDB API☆15Updated this week
- HLA-II ligand predictor.☆45Updated 2 years ago
- ☆96Updated 6 months ago
- HLA-I ligand predictor☆43Updated 3 months ago
- ☆27Updated last year
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆19Updated 5 years ago
- Mutation effects predicted from sequence co-variation☆70Updated 8 years ago
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆87Updated 3 years ago
- NetTCR-2.0. Sequence-based prediction of peptide-TCR binding☆35Updated 3 years ago
- Geometric deep learning of protein–DNA binding specificity☆76Updated 9 months ago