viragbioinfo / IMMREP_2022_TCRSpecificityLinks
☆19Updated 2 years ago
Alternatives and similar repositories for IMMREP_2022_TCRSpecificity
Users that are interested in IMMREP_2022_TCRSpecificity are comparing it to the libraries listed below
Sorting:
- STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…☆26Updated 2 months ago
- ☆41Updated 3 months ago
- Large language modeling applied to T-cell receptor (TCR) sequences.☆53Updated 3 years ago
- 📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential☆18Updated 2 months ago
- python tools for TCR:peptide-MHC modeling and analysis☆79Updated last year
- Generic TCR-epitope recognition prediction using CNN approach on both known and novel epitopes☆16Updated 2 years ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆53Updated last year
- ☆74Updated last year
- Predicting immunogenic peptide recognized by TCR through ensemble deep learning☆15Updated last year
- ☆88Updated 8 months ago
- ☆49Updated last year
- Code for "T Cell Receptor Specificity Prediction with Bimodal Attention Networks" (https://doi.org/10.1093/bioinformatics/btab294, ISMB 2…☆29Updated last year
- HLA-II ligand predictor.☆43Updated 2 years ago
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆32Updated 3 years ago
- NetTCR-2.0. Sequence-based prediction of peptide-TCR binding☆34Updated 3 years ago
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆81Updated 3 years ago
- HLA-I ligand predictor☆40Updated 6 months ago
- ☆9Updated 2 years ago
- A visualization software for antibody multi sequence alignment☆18Updated last year
- ☆37Updated 5 months ago
- ☆45Updated 3 years ago
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆38Updated 9 months ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆69Updated 2 years ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆18Updated 4 years ago
- ☆15Updated last month
- Collection of papers related to BCR repertoire analyses☆19Updated 3 years ago
- ☆27Updated last month
- ☆11Updated last year
- surrogate quantitative interpretability for deepnets☆23Updated 2 weeks ago
- Code repository of "Deep generative design of RNA family sequences"☆35Updated 11 months ago