☆19Jun 11, 2026Updated 2 months ago
Alternatives and similar repositories for STCRpy
Users that are interested in STCRpy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Altered TCR Ligand Affinities and Structures☆13Dec 1, 2023Updated 2 years ago
- peptide-MHC modeling, binding prediction, and protein design.☆32Jul 24, 2026Updated last month
- Highly informative TCR representation model☆16Nov 26, 2025Updated 9 months ago
- Official PyTorch implementation of "ProteinMAE: Masked Autoencoder for Protein Surface Self-supervised Learning".☆19May 7, 2024Updated 2 years ago
- TCRGP, a novel Gaussian process method that can predict if TCRs recognize certain epitopes. This method can utilize different CDR sequenc…☆30Jan 31, 2023Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- PyMOL Plugin for displaying polar contacts☆20Mar 11, 2019Updated 7 years ago
- EnsembleFlex - Flexibility Analysis of Structure Ensembles☆19Sep 10, 2025Updated 11 months ago
- TEINet: a deep learning framework for prediction of TCR-epitope binding specificity☆16Jun 30, 2023Updated 3 years ago
- Scoring methods for predicting the DDG upon protein mutation☆17Feb 20, 2023Updated 3 years ago
- The package of ProBuilder from Longxing Cao lab☆25Jan 19, 2026Updated 7 months ago
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- Weighted Ensemble Data Analysis and Plotting☆27Jul 17, 2026Updated last month
- ☆19Nov 18, 2025Updated 9 months ago
- All the fun and adventure of MHC naming, now in Python☆10Apr 5, 2026Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A comprehensive repository of scripts, software, and tutorials for molecular evolution, computational protein design, and structural bioi…☆33Jul 26, 2026Updated last month
- AbBFN2: A flexible antibody foundation model based on Bayesian Flow Networks☆39Jun 4, 2025Updated last year
- Demos of many Rosetta applications☆25Jun 10, 2025Updated last year
- Metadiffusion implemented in Boltz-2☆24Feb 23, 2026Updated 6 months ago
- Knowledge-Guided Diffusion Model for 3D Ligand-Pharmacophore Mapping☆51Jun 5, 2026Updated 2 months ago
- gmx_corr converts the covariance matrix which is produced by GROMACS covar to cross correlation matrix and creates a heat map figure.☆11Oct 11, 2022Updated 3 years ago
- A modular and user-friendly Python framework for protein and ligand engineering workflows on SLURM clusters☆104Jul 28, 2026Updated last month
- ☆60Nov 1, 2024Updated last year
- Interactive visualisation of CellphoneDB results☆13Jan 15, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Input files and binding free energy values from our benchmark with QuantumBind-RBFE☆18Apr 16, 2025Updated last year
- Convert TCR gene names☆15Dec 26, 2025Updated 8 months ago
- MM-PBSA method for GROMACS. For full description, please visit homepage:☆15Aug 1, 2026Updated last month
- Fast algorithms for GLM-PCA.☆17Mar 12, 2025Updated last year
- LoRA for protein language models☆48Jan 24, 2024Updated 2 years ago
- Multi-target de novo molecular generator conditioned on AlphaFold's latent protein embeddings.☆78Mar 27, 2025Updated last year
- MAGPIE☆17May 5, 2024Updated 2 years ago
- Reproducibility Repo for mvTCR paper☆14Apr 2, 2024Updated 2 years ago
- ☆22Oct 4, 2022Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Score-based 3D molecule generation with neural fields - NeurIPS 2024☆27Dec 3, 2024Updated last year
- A unified cross-attention model for predicting antigen binding specificity to both HLA and TCR molecules☆15May 29, 2026Updated 3 months ago
- OpenChord is a Python library for creating chord diagrams.☆11Feb 4, 2025Updated last year
- ☆40Jun 24, 2025Updated last year
- ☆18Aug 18, 2026Updated 2 weeks ago
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…☆18Nov 14, 2023Updated 2 years ago
- Longxing Cao's Contact Molecular Surface without pyrosetta☆15May 24, 2026Updated 3 months ago