TRON-Bioinformatics / TCLP
an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression
☆10Updated last year
Alternatives and similar repositories for TCLP
Users that are interested in TCLP are comparing it to the libraries listed below
Sorting:
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆38Updated last month
- PRedictor of IMmunogenic Epitopes☆20Updated last year
- DRUGZ software☆23Updated 3 years ago
- HLA-II ligand predictor.☆43Updated 2 years ago
- ☆11Updated 5 years ago
- Detects hotspot regions for somatic mutations in 3D protein structures☆2Updated last year
- A database of T-cell receptor sequences☆9Updated 4 years ago
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆32Updated 3 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆27Updated 3 months ago
- TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…☆25Updated 2 years ago
- Absolve antibody variable domain sequence analysis☆16Updated 6 years ago
- ☆47Updated 2 years ago
- ☆38Updated last year
- Code and data used in The Great Repertoire Project☆30Updated 3 years ago
- 📂 HLA allele frequencies in tab-delimited format, downloaded from AFND.☆20Updated last year
- 📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential☆18Updated last month
- iCodon customizes gene expression based on the codon composition☆15Updated last year
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆21Updated 2 years ago
- NetTCR-2.0. Sequence-based prediction of peptide-TCR binding☆33Updated 3 years ago
- HLA-I ligand predictor☆39Updated 4 months ago
- Code from "Deep Learning Of The Regulatory Grammar Of Yeast 5′ Untranslated Regions From 500,000 Random Sequences"☆15Updated 7 years ago
- COSMIS is a framework for quantifying the mutational constraint on amino acid sites in 3D spatial neighborhoods. The framework currently …☆17Updated 2 years ago
- G4Hunter (2012_2015)- IECB - Bordeaux☆13Updated 5 years ago
- off-targeting assessment of Cas9 gRNAs☆13Updated 4 years ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- ☆29Updated 5 months ago
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆19Updated 2 years ago
- flexible CDR based distance metrics☆62Updated 8 months ago
- BAGEL software☆27Updated last year
- ☆40Updated 4 years ago