bm2-lab / PanPep
☆49Updated last year
Alternatives and similar repositories for PanPep:
Users that are interested in PanPep are comparing it to the libraries listed below
- TEIM: TCR-Epitope Interaction Modeling☆47Updated last year
- Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"☆43Updated 6 months ago
- ☆39Updated 3 weeks ago
- python tools for TCR:peptide-MHC modeling and analysis☆74Updated last year
- open source code for Tencent tFold☆96Updated last month
- ☆19Updated 2 years ago
- ☆42Updated 3 years ago
- Predicting immunogenic peptide recognized by TCR through ensemble deep learning☆15Updated 11 months ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆97Updated 7 months ago
- ☆11Updated last year
- ☆81Updated 6 months ago
- Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.☆32Updated 3 months ago
- Large language modeling applied to T-cell receptor (TCR) sequences.☆53Updated 2 years ago
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…☆43Updated 4 months ago
- Public repository describing training and testing of AntiBERTa.☆58Updated 2 years ago
- Convenience Python APIs for antibody numbering using ANARCI☆94Updated 2 months ago
- Code repository of "Deep generative design of RNA family sequences"☆33Updated 9 months ago
- Machine learning models for antibody sequences in PyTorch☆39Updated 3 years ago
- ☆101Updated 9 months ago
- Geometric deep learning of protein–DNA binding specificity☆64Updated last month
- ☆19Updated last week
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆62Updated 2 months ago
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆31Updated 4 months ago
- Learning the language of protein-protein interactions☆68Updated 3 weeks ago
- ☆34Updated 2 years ago
- ☆52Updated last year
- Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆58Updated 8 months ago
- DeepAAI☆31Updated 3 months ago
- ☆9Updated 2 years ago
- A visualization software for antibody multi sequence alignment☆18Updated 10 months ago