bm2-lab / PanPepLinks
☆49Updated last year
Alternatives and similar repositories for PanPep
Users that are interested in PanPep are comparing it to the libraries listed below
Sorting:
- ☆90Updated 9 months ago
- ☆20Updated 2 years ago
- Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"☆48Updated 9 months ago
- python tools for TCR:peptide-MHC modeling and analysis☆80Updated last year
- ☆11Updated last year
- Predicting immunogenic peptide recognized by TCR through ensemble deep learning☆16Updated last year
- ☆41Updated 4 months ago
- Geometric deep learning of protein–DNA binding specificity☆77Updated 4 months ago
- TEIM: TCR-Epitope Interaction Modeling☆50Updated 2 years ago
- AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt…☆88Updated this week
- ☆35Updated 2 years ago
- ☆9Updated 2 years ago
- Code repository of "Deep generative design of RNA family sequences"☆35Updated last year
- ☆47Updated 3 years ago
- Large language modeling applied to T-cell receptor (TCR) sequences.☆54Updated 3 years ago
- STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…☆28Updated 3 months ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆100Updated last week
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆40Updated 10 months ago
- A visualization software for antibody multi sequence alignment☆20Updated last year
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆71Updated 2 years ago
- Learning to Generate UTR Sequences for Optimized Ribosome Load and Gene Expression☆20Updated 2 months ago
- iLearnPlus is the first machine-learning platform with both graphical- and web-based user interface that enables the construction of auto…☆112Updated last year
- open source code for Tencent tFold☆106Updated 4 months ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆56Updated last year
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆42Updated last year
- ☆89Updated last month
- ☆76Updated last year
- Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information☆27Updated last year
- Convenience Python APIs for antibody numbering using ANARCI☆101Updated 2 months ago
- MaveDB API☆11Updated this week