jiangdada1221 / TEINetLinks
TEINet: a deep learning framework for prediction of TCR-epitope binding specificity
☆16Updated 2 years ago
Alternatives and similar repositories for TEINet
Users that are interested in TEINet are comparing it to the libraries listed below
Sorting:
- Machine learning models for antibody sequences in PyTorch☆41Updated 4 years ago
- Machine learning-driven antibody design☆63Updated 2 years ago
- ☆36Updated last year
- ☆46Updated 10 months ago
- ☆30Updated 8 months ago
- Source code for fitting thermodynamic models (MoCHI), downstream analyses and to reproduce all figures in the following publication: Mapp…☆22Updated 2 years ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆71Updated last year
- Neural networks for deep mutational scanning data☆72Updated 8 months ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆26Updated last year
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- ☆50Updated 2 months ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- Tools for annotation, processing and ML for antibody sequences☆39Updated this week
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆39Updated last year
- [Nature Machine Intelligence] ImmunoStruct enables multimodal deep learning for immunogenicity prediction☆34Updated this week
- Fragment binding prediction with ColabFold☆41Updated 3 months ago
- The DSSP building software☆50Updated 2 years ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated 2 years ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Updated 2 months ago
- ☆37Updated 2 years ago
- RNA Multiple Sequence Alignment☆47Updated 2 years ago
- Ultra-fast in-silico structure mutation☆36Updated 10 months ago
- Graph Network for protein-protein interface including language model features☆34Updated last year
- ☆56Updated 5 months ago
- The official pytorch implementation of "LightRoseTTA: High-efficient and Accurate Protein Structure Prediction Using an Ultra-Lightweight…☆15Updated 9 months ago
- Predict the structure of immune receptor proteins☆59Updated last year
- mBER - Manifold Binder Engineering and Refinement. mBER enables antibody binder design by leveraging structure templates and sequence con…☆102Updated last month
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆38Updated last year
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated 2 years ago
- Results and data from the pilot round of the Protein Engineering Tournament☆30Updated 10 months ago