kmayerb / tcrdist2
Quantifiable predictive features define epitope-specific T cell receptor repertoires
☆13Updated 2 years ago
Alternatives and similar repositories for tcrdist2:
Users that are interested in tcrdist2 are comparing it to the libraries listed below
- Summary statistics for repertoires☆16Updated 2 years ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆38Updated 6 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- Explore the cancer relevance of your gene list☆51Updated 2 months ago
- Mean Alterations Using Discrete Expression☆14Updated last year
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- Full annotation using shape-constrained trees☆25Updated last year
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- T cell Receptor and B cell Receptor assembly from single cell RNA sequencing data☆10Updated 7 years ago
- Integrative analysis for scTCR- and scRNA-seq data☆16Updated last month
- Reproducibility Repo for mvTCR paper☆13Updated last year
- CellAnn☆12Updated last year
- benchmark for single-cell RNA-seq imputation methods☆25Updated last year
- ☆47Updated 2 years ago
- Processing of single cell RNAseq data for the recovery of TCRs in python☆28Updated 4 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆35Updated 3 weeks ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆25Updated last year
- Single cell proteomics data processing☆26Updated last month
- BAGEL software☆27Updated last year
- 🏺 Exploring novel tumor epitope identification☆34Updated 4 years ago
- RNA velocity validation☆22Updated 3 years ago
- ☆10Updated this week
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆28Updated 5 years ago
- ☆40Updated 7 years ago
- A novel PSSM based software for predicting class I peptide-HLA binding affinity☆17Updated 8 years ago
- Code for EpiMap data browser☆14Updated 11 months ago
- ☆16Updated 2 months ago
- Detecting TCR involved in immune responses from single RepSeq datasets☆25Updated 5 years ago
- Processing workflow for COVID-19 single cell data☆17Updated 3 years ago
- epigenome analysis to rank transcription factors☆13Updated 5 years ago