Alternatives and similar repositories for ER-BERT

Users that are interested in ER-BERT are comparing it to the libraries listed below

• bm2-lab / PanPep
  ☆50Updated last year
• pengxingang / TEIM
  TEIM: TCR-Epitope Interaction Modeling
  ☆51Updated 2 years ago
• TencentAILabHealthcare / DeepAIR
  ☆38Updated 2 years ago
• a96123155 / TransPHLA-AOMP
  ☆48Updated 3 years ago
• frankligy / DeepImmuno
  Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
  ☆72Updated 2 years ago
• piercelab / tcrmodel2
  ☆42Updated 5 months ago
• gv20-therapeutics / antibody-in-pytorch
  Machine learning models for antibody sequences in PyTorch
  ☆41Updated 4 years ago
• samsledje / D-SCRIPT
  A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions
  ☆104Updated last week
• a96123155 / UTR-LM
  ☆90Updated 11 months ago
• JiangBioLab / DLpTCR
  Predicting immunogenic peptide recognized by TCR through ensemble deep learning
  ☆16Updated last year
• myzhengSIMM / TranSiGen
  ☆31Updated 8 months ago
• viragbioinfo / IMMREP_2022_TCRSpecificity
  ☆20Updated 2 years ago
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆30Updated 2 years ago
• genbio-ai / ModelGenerator
  AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt…
  ☆94Updated this week
• kadiliissaar / DeePhase
  DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…
  ☆17Updated 3 years ago
• jychen01 / PISTE
  ☆22Updated 11 months ago
• UniBind / UniBind
  ☆35Updated 2 years ago
• phbradley / TCRdock
  python tools for TCR:peptide-MHC modeling and analysis
  ☆82Updated last year
• wukevin / tcr-bert
  Large language modeling applied to T-cell receptor (TCR) sequences.
  ☆56Updated 3 years ago
• ddd9898 / DeepNano
  Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.
  ☆39Updated 8 months ago
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆60Updated last year
• Shunsuke-1994 / rfamgen
  Code repository of "Deep generative design of RNA family sequences"
  ☆35Updated last year
• pylelab / rMSA
  RNA Multiple Sequence Alignment
  ☆45Updated 2 years ago
• pth1993 / DeepCE
  A deep learning framework for high-throughput mechanism-driven phenotype screening
  ☆50Updated 4 years ago
• gitter-lab / nn4dms
  Neural networks for deep mutational scanning data
  ☆69Updated 3 months ago
• GreiffLab / manuscript_ab_epitope_interaction
  ☆25Updated last year
• alchemab / antiberta
  Public repository describing training and testing of AntiBERTa.
  ☆61Updated 2 years ago
• YihePang / DisoFLAG
  Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model
  ☆22Updated last year
• TencentAI4S / tfold
  open source code for Tencent tFold
  ☆112Updated 6 months ago
• csi-greifflab / Absolut
  Unconstrained lattice antibody-antigen bindings generator
  ☆110Updated last year