slowkow / allelefrequenciesLinks
š HLA allele frequencies in tab-delimited format, downloaded from AFND.
ā22Updated last year
Alternatives and similar repositories for allelefrequencies
Users that are interested in allelefrequencies are comparing it to the libraries listed below
Sorting:
- āļø Matching T-cell repertoire against a database of TCR antigen specificitiesā39Updated 7 years ago
- Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.ā23Updated 7 years ago
- Identify cell barcodes from single-cell genomics sequencing experimentsā43Updated 4 years ago
- ā49Updated 3 years ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.ā29Updated 6 years ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq dataā27Updated 2 years ago
- BAGEL softwareā28Updated last year
- Explore and download data from the recount3 projectā37Updated 3 months ago
- Visual exploratory analysis of gene expression dataā44Updated 2 months ago
- A portable, flexible, parallelized tool for complete processing of massively parallel reporter assay dataā35Updated last year
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA memā31Updated 7 years ago
- Snakemake pipeline for running MAJIQā23Updated 2 years ago
- Explore the cancer relevance of your gene listā52Updated 3 weeks ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.ā35Updated 2 years ago
- A RepSeq processing swiss-knifeā41Updated last year
- Builds a PEP from SRA or GEO accessionsā54Updated last month
- Assembly of RNA reads to determine the effect of a cancer mutation on protein sequenceā25Updated last year
- processes GoT amplicon data and generates a table of metricsā32Updated 3 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq dataā26Updated 3 months ago
- Code and data used to create the JASPAR UCSC Genome Browser tracks data hubā18Updated last month
- Preprocessing of single-cell RNA-Seq (deprecated)ā62Updated 6 years ago
- Scripts to import your FeatureCounts output into DEXSeqā34Updated 7 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigatorā50Updated 6 years ago
- Computational correction of copy-number effect in CRISPR-Cas9 essentiality screensā32Updated 6 years ago
- Analysis for svaseq paperā20Updated 11 years ago
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from cā¦ā20Updated 9 months ago
- Interactive R package to quantify, analyse and visualise alternative splicingā37Updated this week
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq dataā29Updated 3 years ago
- Decombinator v5: fast, error-correcting analysis of TCR repertoiresā27Updated 4 months ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq datasetā29Updated 6 years ago