zichner / primerDesignLinks
A tool to design highly specific PCR primers for the validation of genomic alterations including structural variants
☆46Updated 8 years ago
Alternatives and similar repositories for primerDesign
Users that are interested in primerDesign are comparing it to the libraries listed below
Sorting:
- for visual evaluation of read support for structural variation☆54Updated last year
- MFEprimer-2.0: A fast thermodynamics-based program for checking PCR primer specificity☆41Updated 4 years ago
- NGS-PrimerPlex is a high-throughput tool for mupltiplex primer design☆60Updated 3 months ago
- TIDDIT - structural variant calling☆76Updated 5 months ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆42Updated 3 weeks ago
- Computational pipeline for calling consensi on R2C2 nanopore data☆31Updated 3 years ago
- Interactive multiscale visualization for structural variation in human genomes☆70Updated 2 weeks ago
- Code for design of diagnostic PCR primers, and metabarcoding markers.☆62Updated last year
- ☆49Updated 10 months ago
- Tool package to perform in-silico CRISPR analysis and assessment☆32Updated last week
- ThermoAlign: software for automated primer design☆27Updated 7 years ago
- My bioinfo toolbox☆50Updated 7 months ago
- Gene Fusion Visualiser☆51Updated 2 years ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆50Updated last week
- PrimerServer2: a high-throughput primer design and specificity-checking platform☆78Updated 2 years ago
- R Package for Non Invasive Prenatal Testing (NIPT) analysis☆42Updated 5 years ago
- Snakemake-based workflow for detecting structural variants in genomic data☆80Updated 7 months ago
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated 4 months ago
- Generic human DNA variant annotation pipeline☆58Updated last year
- Analysis pipelines from Oxford Nanopore Technologies' Research Division☆50Updated 4 years ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 2 years ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆58Updated 8 years ago
- POSTRE: Prediction Of STRuctural variant Effects☆28Updated 7 months ago
- ClassifyCNV: a tool for clinical annotation of copy-number variants☆66Updated 2 years ago
- De novo transcriptome assembler for short reads☆63Updated 7 years ago
- Workflows for germline short variant discovery in WGS data. PairedEndSingleSampleWf has been superseded in Broad production by https://gi…☆56Updated 5 years ago
- visual analysis of your VCF files☆36Updated 2 years ago
- Detection of CNVs (deletion/duplication) in target panel based NGS data☆16Updated 2 years ago
- Merging, Annotation, Validation, and Illustration of Structural variants☆75Updated 2 years ago
- A collection of command line tools for working with sequencing data☆51Updated last month