dohalloran / PrimerMapperLinks
GUI for batch primer design with graphical output for PCR and SNP detection
☆17Updated 7 years ago
Alternatives and similar repositories for PrimerMapper
Users that are interested in PrimerMapper are comparing it to the libraries listed below
Sorting:
- Quality assessment of de novo transcriptome assemblies from RNA-Seq data☆25Updated 3 weeks ago
- Hitting associations with k-mers☆44Updated 3 years ago
- PERF is an Exhaustive Repeat Finder☆34Updated 4 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆35Updated last year
- Find Unique genomic Regions☆32Updated last month
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.☆46Updated 6 years ago
- Trimming tool for Oxford Nanopore sequence data☆22Updated 4 years ago
- 🍶 Genome assembly with short sequence reads☆25Updated last year
- A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies☆35Updated last year
- reference free variant assembly☆34Updated 2 years ago
- Used to trim off the primer sequence from mutiplex amplicon sequencing☆24Updated last year
- Combine reference and assembled transcriptomes for RNA-Seq analysis☆22Updated 5 years ago
- The repository keeps the files for an IPython notebook on about how to make a simple genome assembler using python☆30Updated 7 years ago
- exploring viral genome assembly with variation graph tools☆20Updated 5 years ago
- fastest GTF/GFF-to-BED converter chilling around☆30Updated 2 months ago
- Exascale Maximum Likelihood (ExaML) code for phylogenetic inference using MPI☆50Updated 5 years ago
- ☆36Updated 7 months ago
- MIRA sequence assembler☆30Updated 11 months ago
- A toolkit for annotation of transposable element families from unassembled sequence reads☆30Updated 2 years ago
- fastq quality assessment and filtering tool☆18Updated 3 years ago
- Whole Exome/Whole Genome Sequencing alignment pipeline☆28Updated last year
- Toolkit for manipulating FASTA and SAM files☆20Updated last year
- To tackle the exponentially increasing throughput of Next-Generation Sequencing (NGS), most of the existing short-read aligners can be co…☆31Updated last year
- Viral Identification and Discovery - A viral characterization pipeline built in Nextflow.☆11Updated 5 years ago
- Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop☆18Updated 9 years ago
- A command line tool to compute mapping statistics from a BAM file☆25Updated 3 years ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆33Updated 6 months ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆36Updated 6 years ago
- ☆27Updated 9 months ago
- PanGenomePipeline☆16Updated last year