dohalloran / PrimerMapperLinks
GUI for batch primer design with graphical output for PCR and SNP detection
☆17Updated 7 years ago
Alternatives and similar repositories for PrimerMapper
Users that are interested in PrimerMapper are comparing it to the libraries listed below
Sorting:
- reference free variant assembly☆34Updated 2 years ago
- Hitting associations with k-mers☆44Updated 3 years ago
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.☆46Updated 6 years ago
- Find Unique genomic Regions☆32Updated 2 months ago
- Quality assessment of de novo transcriptome assemblies from RNA-Seq data☆25Updated last month
- PERF is an Exhaustive Repeat Finder☆34Updated 4 years ago
- Toolkit for manipulating FASTA and SAM files☆20Updated last year
- FAST: Fast Analysis of Sequences Toolbox☆31Updated 6 years ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆33Updated 7 months ago
- Exascale Maximum Likelihood (ExaML) code for phylogenetic inference using MPI☆50Updated 5 years ago
- 🍶 Genome assembly with short sequence reads☆25Updated last year
- A toolkit for annotation of transposable element families from unassembled sequence reads☆31Updated 2 weeks ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆35Updated last year
- Whole Exome/Whole Genome Sequencing alignment pipeline☆29Updated last year
- full taxonomer cython repository☆22Updated 6 years ago
- ☆18Updated 8 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Updated 3 years ago
- Reference-free variant discovery in large eukaryotic genomes☆41Updated 4 years ago
- A Perl extension and collection of utilities for Next-Generation Sequencing (NGS) data analysis☆23Updated 2 months ago
- Malleable All-seeing Journal Of Research Artifacts☆35Updated 2 years ago
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆44Updated 2 months ago
- ☆15Updated 7 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆36Updated 6 years ago
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Updated 2 years ago
- Collection of utilities for working with PacBio-based assemblies☆13Updated 2 years ago
- URMAP ultra-fast read mapper☆38Updated 5 years ago
- This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion☆21Updated 4 years ago
- Software for detecting transposable element insertions from next-generation sequencing data☆14Updated 4 years ago
- Assembly by Reduced Complexity (ARC)☆42Updated 9 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆39Updated 2 years ago