dohalloran / PrimerMapperLinks
GUI for batch primer design with graphical output for PCR and SNP detection
β17Updated 7 years ago
Alternatives and similar repositories for PrimerMapper
Users that are interested in PrimerMapper are comparing it to the libraries listed below
Sorting:
- PERF is an Exhaustive Repeat Finderβ34Updated 4 years ago
- πΆ Genome assembly with short sequence readsβ25Updated last year
- Whole Exome/Whole Genome Sequencing alignment pipelineβ28Updated last year
- 𧬠MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotationsβ34Updated last year
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.β46Updated 6 years ago
- Quality assessment of de novo transcriptome assemblies from RNA-Seq dataβ24Updated 3 months ago
- fastest GTF/GFF-to-BED converter chilling aroundβ27Updated last month
- Hitting associations with k-mersβ44Updated 3 years ago
- reference free variant assemblyβ34Updated 2 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classesβ31Updated last year
- Validate FastQ Filesβ36Updated 6 years ago
- Exascale Maximum Likelihood (ExaML) code for phylogenetic inference using MPIβ50Updated 5 years ago
- Collection of utilities for working with PacBio-based assembliesβ13Updated 2 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF fβ¦β30Updated 3 years ago
- MPBoot: Fast phylogenetic maximum parsimony tree inference and bootstrap approximationβ20Updated 9 months ago
- Combine reference and assembled transcriptomes for RNA-Seq analysisβ21Updated 5 years ago
- fastq quality assessment and filtering toolβ18Updated 2 years ago
- A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL. This version of the pipeline uses the Rubra/Ruffus frameworβ¦β34Updated 11 years ago
- A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)β24Updated 4 years ago
- Toolkit for manipulating FASTA and SAM filesβ19Updated last year
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualitiesβ25Updated 5 years ago
- MIRROR OF: The European Molecular Biology Open Software Suite (from git://anonscm.debian.org/debian-med/emboss.git)β27Updated 3 years ago
- β° covtobed | Convert the coverage track from a BAM file into a BED fileβ44Updated 3 months ago
- A toolkit to design standard primers, multiplexed primers, and primers around SV'sβ12Updated 2 years ago
- Nextflow workflow for automatic repeat detection, classification and maskingβ13Updated 7 years ago
- To tackle the exponentially increasing throughput of Next-Generation Sequencing (NGS), most of the existing short-read aligners can be coβ¦β31Updated last year
- Find Unique genomic Regionsβ30Updated this week
- β18Updated 8 years ago
- A toolkit for annotation of transposable element families from unassembled sequence readsβ30Updated 2 years ago
- A tool to extract LOH blocks from VCF, BAM and FASTA dataβ24Updated last year