vanvalenlab / kiosk-console
DeepCell Kiosk Distribution for Kubernetes on GKE and AWS
☆35Updated last year
Alternatives and similar repositories for kiosk-console:
Users that are interested in kiosk-console are comparing it to the libraries listed below
- SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.☆37Updated last year
- CytoData 2016 – origin story☆18Updated 7 years ago
- Code accompanying the manuscript "Tissue Schematics map the specialization of immune tissue motifs and their appropriation by tumors"☆10Updated 2 years ago
- An Interactive Image Segmentation Filter for Multiplex Microscopy☆29Updated 2 months ago
- Tools and scripts for EASI-FISH image data analysis☆17Updated 2 years ago
- ☆23Updated last year
- astir | Automated cell identity from single-cell multiplexed imaging and proteomics 🖥🔬✨☆52Updated 9 months ago
- Data processing tools associated with deepcell☆11Updated last year
- Self-supervised models for encoding protein localization patterns from microscopy images☆75Updated 6 months ago
- ☆55Updated this week
- Community-contributed and experimental CellProfiler modules.☆63Updated 2 months ago
- Cloud-based data annotation tools for biological images☆79Updated last year
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue image…☆51Updated 10 months ago
- A toolkit for processing multiplexed tissue images☆59Updated this week
- ☆65Updated 2 years ago
- R package for visualization of highly multiplexed imaging data☆32Updated 9 months ago
- Predicting Cell Health with Morphological Profiles☆36Updated 3 years ago
- AICS ML Segmentation (One-Way) Mirror☆27Updated 3 years ago
- Morphological profiling using deep learning☆116Updated 5 months ago
- Library for managing, storage, viewing, and working with spatial transcriptomics data using Imglib2, N5, BigDataViewer and Fiji.☆26Updated last month
- Aligning images acquired with the IBEX microscopy imaging technique☆17Updated 2 months ago
- ☆52Updated this week
- Python package to export tensorflow models as DeepImageJ bundled models☆17Updated 2 years ago
- Histology Topography Cytometry Analysis Toolbox☆67Updated last year
- An automatic deep learning algorithm for spot detection in fluorescence microscopy images.☆18Updated 2 months ago
- Raw format to OME-TIFF converter☆50Updated 3 weeks ago
- Spatial analysis toolkit for single cell multiplexed tissue data☆30Updated 7 months ago
- Microscopy Image Cytometry Toolkit☆116Updated 2 years ago
- TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…☆22Updated 2 years ago