vanvalenlab / kiosk-consoleLinks
DeepCell Kiosk Distribution for Kubernetes on GKE and AWS
☆36Updated 2 years ago
Alternatives and similar repositories for kiosk-console
Users that are interested in kiosk-console are comparing it to the libraries listed below
Sorting:
- SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.☆38Updated 2 years ago
- Library for managing, storage, viewing, and working with spatial transcriptomics data using Imglib2, N5, BigDataViewer and Fiji.☆28Updated last month
- IHC-image analysis workflow☆23Updated 7 years ago
- Predicting Cell Health with Morphological Profiles☆37Updated 3 years ago
- Self-supervised models for encoding protein localization patterns from microscopy images☆76Updated 10 months ago
- Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue image…☆53Updated last year
- Code accompanying "Prospective identification of hematopoietic lineage choice by deep learning", Nature methods 2017, DOI:10.1038/nmeth.4…☆20Updated 3 years ago
- TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…☆22Updated 2 years ago
- AICS ML Segmentation (One-Way) Mirror☆27Updated 4 years ago
- astir | Automated cell identity from single-cell multiplexed imaging and proteomics 🖥🔬✨☆53Updated 3 weeks ago
- Histology Topography Cytometry Analysis Toolbox☆67Updated last year
- Code accompanying the manuscript "Tissue Schematics map the specialization of immune tissue motifs and their appropriation by tumors"☆10Updated 2 years ago
- Minimum Information about Tissue Imaging☆20Updated last year
- ☆23Updated 2 years ago
- CytoData 2016 – origin story☆18Updated 7 years ago
- Python package to export tensorflow models as DeepImageJ bundled models☆17Updated 2 years ago
- A toolkit for processing multiplexed tissue images☆61Updated 3 weeks ago
- ☆15Updated 10 months ago
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- Spatial analysis toolkit for single cell multiplexed tissue data☆30Updated 10 months ago
- An Interactive Image Segmentation Filter for Multiplex Microscopy☆30Updated 5 months ago
- Fast reconstruction of spatial networks from bioimages.☆25Updated 2 months ago
- ☆16Updated 3 years ago
- Microscopy Image Cytometry Toolkit☆116Updated 3 years ago
- Self-Supervised Vision Transformers for multiplexed imaging datasets☆54Updated last year
- ☆27Updated 9 months ago
- A plugin to visualise 3D spatial single cell omics☆22Updated last month
- Single-cell exploratory data analysis for RNA-Seq☆40Updated 4 years ago
- Python API and Jupyter widget for Vitessce☆50Updated this week
- Creating multi-resolution embeddings and clusters from high dimensional data☆54Updated 9 months ago