vanvalenlab / deepcell-tfLinks
Deep Learning Library for Single Cell Analysis
☆472Updated last year
Alternatives and similar repositories for deepcell-tf
Users that are interested in deepcell-tf are comparing it to the libraries listed below
Sorting:
- An introduction to deepcell and deep learning☆155Updated last year
- Cloud-based data annotation tools for biological images☆84Updated last year
- A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data☆190Updated this week
- ☆207Updated last week
- CellProfiler tutorial pipelines and images☆98Updated 2 months ago
- Open source Python library for building bioimage analysis pipelines☆187Updated this week
- Omnipose: a high-precision solution for morphology-independent cell segmentation☆136Updated last week
- PAthological QUpath Obsession - QuPath and Python conversations☆130Updated 4 months ago
- ☆205Updated 2 years ago
- Morphological profiling using deep learning☆123Updated last year
- Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python☆221Updated last month
- Codebase for "A Foundation Model for Cell Segmentation"☆166Updated 2 months ago
- Python package for processing image-based profiling data☆131Updated this week
- A self-explanatory, hands-on intro to bioimage analysis in python. Slightly outdated but still much liked by learners.☆99Updated 2 years ago
- Learn morphological states of dynamic cells☆12Updated 2 years ago
- Multiple-choice microscopy pipeline☆144Updated 2 months ago
- ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy☆622Updated last month
- ☆91Updated 2 months ago
- ☆28Updated 2 years ago
- Lecture materials "Bio-image analysis, biostatistics, programming and machine learning for computational biology" at the Center of Molecu…☆232Updated 2 years ago
- Track cells and build cell lineages☆35Updated last year
- ☆69Updated 11 months ago
- Segment Anything for Microscopy☆635Updated this week
- multimodal whole slide image registration in a graph structure☆99Updated last year
- Open-source software for exploring and analyzing large, high-dimensional image-derived data.☆166Updated 5 months ago
- Toolbox for the analysis of smFISH images.☆71Updated 2 years ago
- an extension that wraps a Cellpose environment such that WSI can be analyzed using Cellpose through QuPath.☆86Updated last week
- QuPath extension for Segment Anything Model (SAM)☆126Updated 5 months ago
- Three dimensional cross-modal image inference☆161Updated 3 months ago
- Read and write life sciences file formats☆142Updated 7 months ago