vanvalenlab / intro-to-deepcellLinks
An introduction to deepcell and deep learning
☆150Updated 8 months ago
Alternatives and similar repositories for intro-to-deepcell
Users that are interested in intro-to-deepcell are comparing it to the libraries listed below
Sorting:
- Integrated pipeline for multiplexed image analysis☆91Updated 3 months ago
- Multiple-choice microscopy pipeline☆133Updated 4 months ago
- Cloud-based data annotation tools for biological images☆81Updated last year
- TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…☆58Updated 2 months ago
- ☆172Updated last week
- CODEX data processing code☆12Updated 2 weeks ago
- A pixel classification based multiplexed image segmentation pipeline☆96Updated last year
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆57Updated last year
- Foundation Model for Multiplex Spatial Proteomic Images☆66Updated last month
- CellProfiler tutorial pipelines and images☆93Updated 2 months ago
- QuST: QuPath Extension for Integrative Whole Slide Image and Spatial Transcriptomics Analysis☆28Updated 3 weeks ago
- Biologically-informed deep learning for cell segmentation of subcelluar spatial transcriptomics data☆43Updated last year
- multimodal whole slide image registration in a graph structure☆87Updated last year
- Sub-cellular spatial transcriptomics Cell Segmentation☆66Updated last year
- ☆63Updated 5 months ago
- ☆135Updated 6 months ago
- Deep learning on histopathology images.☆125Updated 3 years ago
- comseg☆23Updated 5 months ago
- Deep Learning Library for Single Cell Analysis☆460Updated 10 months ago
- version 1 scripts for CODA☆50Updated last year
- Accessible and interoperable whole slide image analysis☆99Updated last week
- An Interactive Image Segmentation Filter for Multiplex Microscopy☆30Updated 5 months ago
- ☆33Updated last year
- Train a model to predict gene expression from histology slides.☆104Updated 3 years ago
- ☆51Updated 5 months ago
- Piecewise alignment for layers of mosaics☆25Updated last week
- A neural network software for using Molecular labelling to improve pathological annotation of H and E tissues☆32Updated 5 months ago
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆77Updated 4 years ago
- Super-resolved spatial transcriptomics by deep data fusion☆74Updated 2 years ago
- Histology Topography Cytometry Analysis Toolbox☆67Updated last year