A JupyterBook site for napari workshop materials
☆10Jul 11, 2022Updated 4 years ago
Alternatives and similar repositories for napari-workshops
Users that are interested in napari-workshops are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Prototype implementation of napari-integrated CNN training viewer☆14Dec 27, 2024Updated last year
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated last year
- Napari training material for a workshop by the CZI funded initiatives LIBRE hub, Napari, and several amazing volunteers☆10Sep 28, 2023Updated 2 years ago
- ☆14Jan 25, 2024Updated 2 years ago
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Aug 13, 2021Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆13Apr 27, 2020Updated 6 years ago
- dask empowered fast4dreg☆17Mar 11, 2026Updated 4 months ago
- Accelerated CellStitch for 3D labeling of anisotropic image stacks☆15Mar 1, 2026Updated 4 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Updated this week
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆93Jun 8, 2026Updated last month
- ☆23Mar 26, 2021Updated 5 years ago
- Affinity based segmentation algorithms and tools☆12May 12, 2025Updated last year
- A stable diffusion demo for napari☆11Jun 7, 2026Updated last month
- How to use Aligning Big Brains and Atlases with Python☆14May 3, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari☆34Jul 10, 2026Updated 2 weeks ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Jan 5, 2026Updated 6 months ago
- Dataset EXploration & Processing☆33May 11, 2023Updated 3 years ago
- Linking napari layers with Matplotlib plots☆45Jul 1, 2026Updated 3 weeks ago
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated 2 years ago
- Guides and code for 3D nuclear instance segmentation☆23Dec 2, 2025Updated 7 months ago
- MultiModal Big Image Data Sharing and Exploration☆20Jan 13, 2023Updated 3 years ago
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆39Jul 9, 2024Updated 2 years ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Nov 25, 2025Updated 8 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Cookiecutter for napari plugins☆73Nov 6, 2024Updated last year
- Read MRC format image files into napari using the mrcfile package from CCP-EM☆19May 17, 2024Updated 2 years ago
- Speed up coding/extending image analysis in Python.☆37May 9, 2026Updated 2 months ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 5 years ago
- clEsperanto - GPU-accelerated image processing across languages and platforms☆11Feb 13, 2021Updated 5 years ago
- Generate multifunctional and macro recordable GUIs from Python classes☆46Jun 23, 2026Updated last month
- ☆19Updated this week
- A napari plugin to view and edit layer metadata☆13Updated this week
- A Python package to download neuronal morphologies☆17Jul 14, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Napari gaming☆17Dec 22, 2021Updated 4 years ago
- Registration to BrainGlobe atlases in napari using Elastix☆30Jul 16, 2026Updated last week
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆25Jun 3, 2026Updated last month
- Teaching materials and outline for the Pasteur Bioimage Analysis vour☆17Jun 2, 2025Updated last year
- A place to collect information used in lectures, demos, workshops, etc.☆17Sep 26, 2024Updated last year
- Online documentation and reference for CLIJ☆28May 21, 2021Updated 5 years ago
- Python image segmentation plugin☆31Jan 13, 2021Updated 5 years ago