Bertinus / FLeCSLinks
Functional and Learnable Cell dynamicS
☆19Updated 6 months ago
Alternatives and similar repositories for FLeCS
Users that are interested in FLeCS are comparing it to the libraries listed below
Sorting:
- ☆63Updated 2 years ago
- ☆65Updated last month
- ☆87Updated last year
- ☆64Updated 4 months ago
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell leve…☆119Updated last year
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆53Updated 3 years ago
- Modeling complex perturbations with CellFlow☆102Updated last week
- ☆38Updated last month
- Models and datasets for perturbational single-cell omics☆168Updated 3 years ago
- A simulator for single-cell expression data guided by gene regulatory networks☆70Updated last year
- ☆34Updated 7 months ago
- spatial transcriptome, single cell☆71Updated 2 years ago
- Conditional out-of-distribution prediction☆62Updated last year
- Diffusion model for gene regulatory network inference.☆23Updated 4 months ago
- Semi-supervised adversarial neural networks for classification of single cell transcriptomics data☆76Updated 11 months ago
- SIMBA: SIngle-cell eMBedding Along with features☆64Updated last year
- PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation☆57Updated 4 months ago
- Quantifying experimental perturbations at single cell resolution☆112Updated last year
- CellBox: Interpretable Machine Learning for Perturbation Biology☆56Updated 2 years ago
- Template repository for creating novel models with scvi-tools☆20Updated 2 years ago
- Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.☆31Updated 4 months ago
- Unsupervised Deep Disentangled Representation of Single-Cell Omics☆56Updated this week
- single cell foundation model for Gene network inference and more☆17Updated 2 weeks ago
- Simple scVI implementation☆12Updated 2 weeks ago
- 🏃 The go-to single-cell Foundation Model☆123Updated last week
- ☆86Updated 2 years ago
- Deep learning model for single-cell inference of multi-omic profiles from a single input modality.☆46Updated 2 years ago
- Learning cell communication from spatial graphs of cells☆114Updated last year
- pytorch dataloaders for single-cell perturbation data☆37Updated this week
- scPerturb: A resource and a python/R tool for single-cell perturbation data☆156Updated 9 months ago