Modeling and predicting single-cell multi-gene perturbation responses with scLAMBDA
☆29Mar 20, 2026Updated 6 months ago
Alternatives and similar repositories for scLAMBDA
Users that are interested in scLAMBDA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- scMODAL: A general deep learning framework for single-cell Multi-Omics Data Alignment with feature Links☆24Jun 10, 2025Updated last year
- Decoding Single-Cell Omics of Perturbation Responses Using DeSCOPE☆29Sep 21, 2026Updated 3 weeks ago
- Single-cell perturbation effects prediction benchmark☆106Sep 14, 2026Updated last month
- INSPIRE: interpretable, flexible and spatially-aware integration of multiple spatial transcriptomics datasets from diverse sources☆23May 28, 2026Updated 4 months ago
- ☆12May 14, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation☆69Jan 12, 2026Updated 9 months ago
- ☆31Oct 14, 2024Updated 2 years ago
- [Cell Patterns] Codes for paper: scELMo: Embeddings from Language Models are Good Learners for Single-cell Data Analysis☆25Jan 31, 2026Updated 8 months ago
- ☆75Jan 14, 2026Updated 9 months ago
- Single-Cell (Perturbation) Model Library☆129Jul 27, 2026Updated 2 months ago
- ☆18Jan 30, 2026Updated 8 months ago
- ☆15Jul 24, 2024Updated 2 years ago
- scDataset: Scalable Data Loading for Deep Learning on Large-Scale Single-Cell Omics☆52Jan 30, 2026Updated 8 months ago
- Comprehensive suite for evaluating perturbation prediction models☆163Jul 27, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆41Apr 16, 2025Updated last year
- ☆28Updated this week
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell leve…☆156Aug 14, 2024Updated 2 years ago
- Modeling complex perturbations with CellFlow☆162Updated this week
- Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.☆41Jul 29, 2025Updated last year
- GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations☆418Feb 1, 2025Updated last year
- State is a machine learning model that predicts cellular perturbation response across diverse contexts☆726Jul 24, 2026Updated 2 months ago
- ☆15Jun 27, 2025Updated last year
- ☆325Mar 18, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Differentiable simulation of proliferating and active cell clusters.☆15Sep 27, 2026Updated 2 weeks ago
- a light structured Residual autoencoder and mutual nearest neighbor Paring guided Adversarial Network for scRNA-seq batch correction☆15Jul 13, 2023Updated 3 years ago
- CellNavi is a deep learning framework designed to predict genes driving cellular transitions.☆57Jul 10, 2026Updated 3 months ago
- A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simul…☆20Aug 9, 2025Updated last year
- A repository for reproducing experiments from the TxPert paper☆52Mar 25, 2026Updated 6 months ago
- A Predictive World Model of the Transcriptome☆35Oct 18, 2025Updated 11 months ago
- [NeurIPS 2023] Official codes of "MuSe-GNN: Learning Unified Gene Representation From Multimodal Biological Graph Data"☆31Jul 2, 2025Updated last year
- Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…☆16Apr 28, 2025Updated last year
- parallel differential expression for single-cell perturbation sequencing☆31Aug 26, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Framework to learn effective dynamics and couple a macro scale simulator with a fast neural network latent propagator.☆11Apr 19, 2023Updated 3 years ago
- tree-aggregated compositional analysis for high-throughput sequencing data☆12Aug 24, 2022Updated 4 years ago
- Numerical experiments for nested cross-validation paper☆14Jun 10, 2022Updated 4 years ago
- This is a read-only mirror of the CRAN R package repository. mixOmics — Omics Data Integration Project. Homepage: http://www.mixOmics.o…☆10Jun 1, 2018Updated 8 years ago
- Flexible, scalable, sc molQTL analyses using generalized linear models implemented in JAX☆20Updated this week
- Guidelines for giving a bad scientific talk☆12Apr 14, 2022Updated 4 years ago
- ☆25Aug 18, 2026Updated last month