GERP++ code from Sidow Lab modified by Kevin Thornton to compile properly.
☆25Sep 19, 2016Updated 9 years ago
Alternatives and similar repositories for GERPplusplus
Users that are interested in GERPplusplus are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Mar 4, 2025Updated last year
- Method used in the study on germline mutation rate estimation in 68 species of vertebrates.☆17Oct 11, 2021Updated 4 years ago
- predicting DFE and alpha from polymorphism data☆29Oct 4, 2018Updated 7 years ago
- Use hifi to assembly the Sol genome, and dissecting Sol evo☆20May 17, 2023Updated 3 years ago
- RPHAST: Phylogenetic Analysis with Space/Time Models in R☆13Nov 25, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Phylogenetic model exploration with deep learning☆12Jun 15, 2026Updated 2 weeks ago
- Work for the tree sequence inference paper.☆23Oct 19, 2020Updated 5 years ago
- GitHub repository for GenErode, a Snakemake workflow for the analysis of whole-genome sequencing data from historical and modern samples …☆32May 18, 2026Updated last month
- Sorting Intolerant From Tolerant For Genomes☆32Nov 3, 2017Updated 8 years ago
- Scripts for reformatting data. Mainly from tab separated to an esoteric program specific format☆13Mar 19, 2026Updated 3 months ago
- (Greetings_here_is_yet_another) Rate of Adaptive Protein Evolution Software☆10Jul 19, 2024Updated last year
- The MafFilter genome alignment processor☆19Apr 10, 2026Updated 2 months ago
- ☆10Aug 21, 2025Updated 10 months ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆113May 23, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- chloroplast genome assembly using long reads data☆17Jul 8, 2025Updated 11 months ago
- ☆19Sep 22, 2022Updated 3 years ago
- PhyloAcc a software to detect the changes of conservation of a genomic region☆38May 11, 2026Updated last month
- A binary serialization format for sparse, labeled 2D numeric datasets☆12Sep 29, 2015Updated 10 years ago
- Tools for inference of the DFE with dadi☆15Apr 16, 2021Updated 5 years ago
- StrVCTVRE, a structural variant classifier for exonic deletions and duplications☆19Dec 6, 2023Updated 2 years ago
- Tools for improving the sensitivity and specificity of genome alignments☆58Mar 12, 2026Updated 3 months ago
- ☆35Dec 24, 2020Updated 5 years ago
- CMOD Wikidata App built on Django Framework for editing Wikidata with existing GeneWIki bot code☆12Feb 3, 2017Updated 9 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Computational Analysis of Gene Expression Evolution☆48Apr 17, 2026Updated 2 months ago
- Whole organelle genome-wide alignment construction method, which ultilizes BLAST tool, to facilitate phylogeny analysis☆15Aug 27, 2023Updated 2 years ago
- A program to generate a graph which presents a simplified representation of several full length genomes☆13Aug 23, 2018Updated 7 years ago
- Dynamic Elongation of a Genome Assembly Path☆25Apr 29, 2026Updated 2 months ago
- Rust implementation of the wavefront alignment algorithm☆14Jul 4, 2022Updated 3 years ago
- GONE: Scripts, programs and an example data set☆56May 12, 2026Updated last month
- Graph-based Sequence Assembly Toolkit☆24May 7, 2026Updated last month
- Tools for F1 hybrid PSMC (hPSMC) divergence time inference from whole genomes☆15May 29, 2024Updated 2 years ago
- ☆12Jun 12, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A comprehensive toolkit for mutational signature analysis☆42Jul 19, 2024Updated last year
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆46May 23, 2026Updated last month
- ☆13Aug 18, 2023Updated 2 years ago
- ☆17May 30, 2022Updated 4 years ago
- Two-dimensional outlier detection algorithm for pinpointing errors in small species-specific stretches of the multiple sequence alignment…☆17May 27, 2024Updated 2 years ago
- A tool for estimating time-dependent migration rates based on cross-/within-population coalescent rates from MSMC☆16Apr 6, 2025Updated last year
- TELOmere SEARCH in Long sequencing Reads☆13Dec 26, 2025Updated 6 months ago