cyverse / docker-buildsLinks
A place to put docker build files
☆13Updated 2 years ago
Alternatives and similar repositories for docker-builds
Users that are interested in docker-builds are comparing it to the libraries listed below
Sorting:
- ☆13Updated 8 years ago
- deploy a snakemake pipeline directly from version control (under development)☆25Updated this week
- Build an index for your BAM Index (BAI)☆17Updated 10 years ago
- Library for indexing VCF files for random access searches by rsID☆17Updated 2 months ago
- Docker images of bioinformatics software☆21Updated 8 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 6 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated 10 months ago
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆19Updated 6 years ago
- Collection of utilities for working with PacBio-based assemblies☆13Updated 2 years ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 8 years ago
- Whole Exome/Whole Genome Sequencing alignment pipeline☆28Updated last year
- Malleable All-seeing Journal Of Research Artifacts☆35Updated 2 years ago
- Please consider using/contributing to https://github.com/nf-core/sarek☆41Updated 4 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- A server for maintaining high-throughput sequencing QC data☆13Updated 2 months ago
- SARS-CoV-2 variant calling and consensus assembly pipeline☆25Updated 2 years ago
- ☆26Updated 6 years ago
- A webtool for the clinical interpretation of CNVs in rare disease patients☆12Updated 3 years ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- Nextflow workflow for automatic repeat detection, classification and masking☆13Updated 7 years ago
- Samwell: a python package for using genomic files... well☆20Updated 3 years ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆44Updated 2 years ago
- Docker containers for bioinformatics with a small footprint☆23Updated 2 years ago
- ☆11Updated 2 years ago
- A tool to extract LOH blocks from VCF, BAM and FASTA data☆25Updated last year
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- This repository contains the source code of JUDI, a workflow management system for developing complex bioinformatics software with many p…☆33Updated 3 years ago
- Lightweight Python interfaces for reading, writing, and querying genomic regions (BED)☆14Updated last week
- ☆18Updated 8 years ago