Tools for Working with Taxonomic SQL Databases
☆35Oct 28, 2025Updated last year
Alternatives and similar repositories for taxizedb
Users that are interested in taxizedb are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆21Oct 27, 2023Updated 3 years ago
- taxonomic classes for R☆51Jul 28, 2025Updated last year
- Parse scientific names using gnparser (https://github.com/gnames/gnparser)☆15Oct 7, 2026Updated 3 weeks ago
- taxonomy R packages☆44Apr 16, 2024Updated 2 years ago
- Create and Query a Local Copy of GenBank in R☆28Mar 6, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Modern GDAL/PROJ/GEOS stack with lots of extra drivers☆12May 5, 2020Updated 6 years ago
- ARCHIVED Interface to USDA Databases☆13Mar 9, 2026Updated 7 months ago
- ARCHIVED Clean species occurrence records☆34Sep 9, 2022Updated 4 years ago
- Extremely accurate algorithm used to group DNA sequences from microbial communities into operational taxonomic units (proxy for species) …☆14Nov 20, 2018Updated 7 years ago
- R package to access the CITES Speciesplus database☆14Oct 15, 2026Updated 3 weeks ago
- ARCHIVED Fetch Species Origin Data from the Web☆12May 10, 2022Updated 4 years ago
- Manage cached files☆23Jan 19, 2025Updated last year
- ropensci registry☆13Updated this week
- MarineRegions R client☆16Sep 4, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Dendrograms for Evolutionary Analysis☆12Dec 9, 2019Updated 6 years ago
- Introduction to Nanopore Sequencing - Prac material and presentations from The Omics Australia Tutorials Sydney (TOAST) workshop 19th - 2…☆10Jan 12, 2019Updated 7 years ago
- Retrieval-Augmented Generation (RAG) Workflows in R with Local and Web Search☆12Feb 22, 2026Updated 8 months ago
- R client for the Pangaea database☆25Jan 17, 2026Updated 9 months ago
- Common repository for scripts to generate trees from taxonomies. Currently includes ITIS, NCBI, and GBIF.☆16Nov 30, 2015Updated 10 years ago
- R library to access species interaction data of http://globalbioticinteractions.org☆19Oct 10, 2026Updated 3 weeks ago
- This project contains simple methods to measure sample relatedness and identify potential swaps and contamination☆10Jan 8, 2016Updated 10 years ago
- Create graticule objects☆17Feb 13, 2026Updated 8 months ago
- R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software☆10May 17, 2017Updated 9 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ARCHIVED NatureServe R client☆11Aug 6, 2026Updated 2 months ago
- ARCHIVED GeoJSON linting for R (THIS IS NOT THE SRC FOR geojsonlint.com)☆11Sep 9, 2022Updated 4 years ago
- A taxonomic toolbelt for R☆303May 12, 2026Updated 5 months ago
- package for interacting with fisheries databases at openfisheries.org☆28May 13, 2020Updated 6 years ago
- Cython bindings and Python interface to Opal, a SIMD-accelerated database search aligner.☆11Mar 25, 2026Updated 7 months ago
- ARCHIVED Map species occurrence data☆33Sep 9, 2022Updated 4 years ago
- Provides classes for working with sets☆11Oct 25, 2026Updated last week
- command-line and python interface to the uniprot database☆10Jun 11, 2015Updated 11 years ago
- ☆10Sep 29, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A versioned and dynamically updating taxonomic lookup table for land plants☆33Feb 20, 2019Updated 7 years ago
- Assembly based core genome SNP alignments for bacteria☆25Oct 23, 2019Updated 7 years ago
- rOpenSci .github files☆11Jul 29, 2019Updated 7 years ago
- Fishbase API☆44Jul 8, 2024Updated 2 years ago
- Minhash Index Extended to Knead Kmer Intersection☆11Mar 18, 2020Updated 6 years ago
- An R package for using dplyr on matched tree and data objects☆33Feb 19, 2025Updated last year
- Easy to define segments in y-axis for 'ggplot2'.☆27Oct 6, 2019Updated 7 years ago