16S rRNA marker gene upstream and dowstream analysis tutorial for the UCT Hex cluster.
☆12Jan 15, 2021Updated 5 years ago
Alternatives and similar repositories for 16SrRNA-hex-tutorial
Users that are interested in 16SrRNA-hex-tutorial are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Jun 28, 2020Updated 6 years ago
- 宏基因组、代谢组和表型信息关联分析☆11Nov 15, 2018Updated 7 years ago
- 16S rRNA Sequencing Data from the Human Microbiome Project☆11May 14, 2026Updated 5 months ago
- Pipeline for Illumina shotgun sequencing of 16S rRNA amplicon sequences☆14Sep 2, 2016Updated 10 years ago
- ☆10May 31, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- supplementary tables and files☆11Oct 13, 2023Updated 3 years ago
- Pipeline for computing OTU tables from 16S or ITS amplicon sequencing data.☆34Jun 18, 2023Updated 3 years ago
- ☆14Mar 8, 2021Updated 5 years ago
- Code repository site for manuscript: Unraveling the Heterogeneity of Tumor-Infiltrating Myeloid Cells in Immune Checkpoint Blockade: A Si…☆13Jun 24, 2023Updated 3 years ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated 6 months ago
- Higher level repo for aggregating all of Atlas workflow logic for Single Cell☆14Jul 9, 2026Updated 3 months ago
- Detection and Visualization of Exon-Level Copy Number Variants in Targeted Next Generation Sequencing Data☆18Nov 26, 2021Updated 4 years ago
- ☆12Oct 17, 2017Updated 9 years ago
- CircSplice☆11Feb 27, 2019Updated 7 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Handy tools for Microbiome analysis in R☆18May 22, 2019Updated 7 years ago
- Differential Gene Correlation Analysis☆49Jun 30, 2024Updated 2 years ago
- ☆15May 7, 2022Updated 4 years ago
- UHCA☆11Jan 23, 2025Updated last year
- All my handy configuration files, including for stuff like Skyrim. ⚔️☆26Apr 15, 2026Updated 6 months ago
- Automated pipeline for whole bacterial genome analysis based on snakemake☆12May 16, 2022Updated 4 years ago
- Scripts and resources for analyzing sequence data for select eco-functional genes☆20May 25, 2017Updated 9 years ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆13Dec 15, 2021Updated 4 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆51Feb 9, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- single cell Gene co-Expression Network Analysis☆10Sep 6, 2022Updated 4 years ago
- Do microbiome analysis with dada2 and phyloseq object☆17Oct 9, 2024Updated 2 years ago
- Microbiome research☆22May 24, 2022Updated 4 years ago
- A comprehensive and customizable R package for microbiome analysis.☆24Sep 6, 2026Updated last month
- A tutorial on methods of 16S analysis with QIIME 1☆72Jul 26, 2019Updated 7 years ago
- Ａ user-friendly Python toolkit, which provides a comprehensive pipeline to easily explore the cohort-based mutational characterization fo…☆21Oct 27, 2022Updated 4 years ago
- Analysis of (gut) microbiome in Qiime2 and R.☆26Aug 23, 2024Updated 2 years ago
- ☆13Mar 17, 2019Updated 7 years ago
- GraphBio: a shiny web app to easily perform popular visualization analysis for omics data☆34Jul 14, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Ontology-aware neural network (ONN) for microbial community sample source tracking!☆10Oct 11, 2022Updated 4 years ago
- ☆12Oct 10, 2023Updated 3 years ago
- Command-line tool for building Gephi force-directed graph diagrams.☆11Nov 10, 2017Updated 8 years ago
- MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequencing runs)☆14Dec 7, 2016Updated 9 years ago
- ☆10Jun 15, 2017Updated 9 years ago
- Nascent Transcription Processing Pipeline☆12Apr 6, 2026Updated 6 months ago
- Walkthrough code for predicting soil properties using mid infrared spectroscopy☆12Jun 28, 2021Updated 5 years ago