grbot / 16SrRNA-hex-tutorialLinks
16S rRNA marker gene upstream and dowstream analysis tutorial for the UCT Hex cluster.
☆11Updated 4 years ago
Alternatives and similar repositories for 16SrRNA-hex-tutorial
Users that are interested in 16SrRNA-hex-tutorial are comparing it to the libraries listed below
Sorting:
- Software used to develop the TCMA database associated with 10.1016/j.chom.2020.12.001.☆12Updated last year
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆22Updated 6 years ago
- ☆14Updated 3 years ago
- Bioinformatics Pipeline☆13Updated 2 years ago
- ☆18Updated 2 years ago
- Analysis framework for integrating gut microbiome and host gene expression data☆33Updated 3 years ago
- ☆12Updated last year
- CLIP Tool Kit (CTK)☆22Updated last year
- omics data analysis using clusterProfiler ;)☆13Updated last year
- Analysis of (gut) microbiome in Qiime2 and R.☆19Updated 11 months ago
- RNA-seq analysis scripts☆15Updated 3 weeks ago
- Temporal Development of the Gut Microbiome in Early Childhood - The TEDDY Study☆10Updated 7 years ago
- RNAseq analysis with Hisat2, stringtie, and ballgown☆16Updated 5 years ago
- ☆17Updated last year
- ChIP-seq pipeline tool for quality check, normalization, statistical analysis, and visualization of multiple ChIP-seq samples.☆24Updated last month
- Time-Course Multi-Omics data integration☆25Updated last year
- An R package for time course sequencing data analysis☆20Updated 2 years ago
- ☆10Updated 3 months ago
- Microbe-Metabolite INteractions-based metabolic profiles Predictor☆15Updated 2 years ago
- MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data☆16Updated 3 weeks ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- ☆23Updated 4 years ago
- ☆14Updated 7 years ago
- lncRNA-screen☆25Updated 8 years ago
- Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"☆11Updated 4 years ago
- ☆12Updated 4 years ago
- ☆15Updated 7 years ago
- Microbiome research☆21Updated 3 years ago
- CNV analysis workflow code for the manuscript☆13Updated 5 years ago
- Extract Sequence from Genome According to Annotation File☆36Updated 3 months ago