Code relating to http://dx.doi.org/10.2139/ssrn.4132721
☆11Nov 24, 2022Updated 3 years ago
Alternatives and similar repositories for RCC-spatial-mapping
Users that are interested in RCC-spatial-mapping are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The source code of web server TIP, including example data.☆21Mar 28, 2019Updated 7 years ago
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆41Sep 5, 2021Updated 4 years ago
- Code repository for TCAT analyses☆16Sep 26, 2025Updated 11 months ago
- ☆16Sep 13, 2024Updated last year
- ☆37Jan 23, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Method for de novo mutation calling from droplet based single cell RNA seq data☆14Oct 6, 2021Updated 4 years ago
- ☆15Oct 10, 2023Updated 2 years ago
- HCC single cell analysis for Alvarez, Benhammou et al.☆20Apr 30, 2022Updated 4 years ago
- Scripts and Data associated with our publication on genomic signatures to discriminate LUAD and LUSC lung cancer types using TCGA data☆11Mar 2, 2022Updated 4 years ago
- Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease☆17Mar 23, 2024Updated 2 years ago
- Pan-cancer human brain metastases atlas at single-cell resolution☆24Apr 3, 2025Updated last year
- R code for metaanalysis of single cell liver data☆12Feb 1, 2021Updated 5 years ago
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆34Jul 13, 2024Updated 2 years ago
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆50Oct 22, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- scVI extension for unspliced RNA☆15May 18, 2025Updated last year
- Functions to analyze copy number aberrations in single-cell data☆13Feb 3, 2025Updated last year
- ☆14Feb 21, 2023Updated 3 years ago
- ☆18Sep 1, 2023Updated 3 years ago
- repository with the scripts to run examples of the publications with new functionalities of TCGAbiolinks☆17Mar 2, 2022Updated 4 years ago
- Detection of PatIent-Level distances from single cell genomics and pathomics data with Optimal Transport (PILOT)☆26Aug 27, 2026Updated last week
- ☆60Feb 23, 2024Updated 2 years ago
- R for Mass Spectrometry documentation☆15Jun 26, 2026Updated 2 months ago
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Jan 30, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- This is a read-only mirror of the CRAN R package repository. randomForestSRC — Fast Unified Random Forests for Survival, Regression, an…☆10Updated this week
- Spatial Transcriptomic Analysis of OSCC samples☆28Dec 24, 2025Updated 8 months ago
- Spatial transcriptomics of heart tissue☆29Jun 16, 2022Updated 4 years ago
- ☆62Aug 8, 2024Updated 2 years ago
- ☆67Sep 15, 2020Updated 5 years ago
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆23Dec 1, 2024Updated last year
- scOpen: single-cell open chromatin analysis via NMF modelling☆28Feb 4, 2023Updated 3 years ago
- Draw phylogenetic trees of tumor evolution☆87Jul 21, 2023Updated 3 years ago
- ☆33Dec 2, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Codes used in pan-T cell analysis☆69Mar 13, 2023Updated 3 years ago
- The current study provides a comprehensive insights into the PDAC metastatic biology.☆25Updated this week
- ☆34Aug 26, 2022Updated 4 years ago
- ☆12Mar 22, 2023Updated 3 years ago
- These are code and scripts for MVI+ HCC scRNA-seq analysis.☆20Aug 24, 2023Updated 3 years ago
- cell type specific, trait-associated gene regulation☆30Aug 5, 2026Updated 3 weeks ago
- ☆25Aug 15, 2023Updated 3 years ago