ruoyan-li / RCC-spatial-mappingLinks
Code relating to http://dx.doi.org/10.2139/ssrn.4132721
☆10Updated 2 years ago
Alternatives and similar repositories for RCC-spatial-mapping
Users that are interested in RCC-spatial-mapping are comparing it to the libraries listed below
Sorting:
- ☆20Updated last year
- ☆27Updated last week
- Repository to store code used for the analyses presented in "Defining the Regulatory Logic of Breast Cancer Using Single-Cell Epigenetic …☆17Updated 3 months ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆27Updated 4 years ago
- Collection of scripts for analysis of pan fetal immune atlas☆27Updated 3 years ago
- ☆37Updated 2 years ago
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆28Updated last year
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆31Updated 3 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 8 months ago
- ☆30Updated 6 months ago
- Pan-cancer human brain metastases atlas at single-cell resolution☆18Updated 4 months ago
- ☆21Updated 2 years ago
- Draw phylogenetic trees of tumor evolution☆82Updated 2 years ago
- ☆32Updated last year
- Single-Cell Inference of Class Switch Recombination☆19Updated 5 months ago
- ☆19Updated 6 months ago
- ☆16Updated last year
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆22Updated last year
- a simple R data package for curated cancer pathway-specific gene lists☆12Updated 5 years ago
- ☆58Updated last year
- These are code and scripts for MVI+ HCC scRNA-seq analysis.☆19Updated 2 years ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆42Updated 2 years ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Updated 6 months ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆38Updated 4 years ago
- Integration of gut cell atlases☆27Updated 6 months ago
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆50Updated 7 months ago
- Accurate and fast cell marker gene identification with COSG☆47Updated 5 months ago
- ☆22Updated 2 years ago
- We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…☆11Updated 10 months ago
- Aligning gene expression trajectories of single-cell reference and query systems☆73Updated 2 weeks ago