ruoyan-li / RCC-spatial-mappingLinks
Code relating to http://dx.doi.org/10.2139/ssrn.4132721
☆10Updated 2 years ago
Alternatives and similar repositories for RCC-spatial-mapping
Users that are interested in RCC-spatial-mapping are comparing it to the libraries listed below
Sorting:
- ☆18Updated 5 months ago
- ☆20Updated last year
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆31Updated 2 years ago
- ☆26Updated last week
- ☆30Updated 5 months ago
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆28Updated last year
- ☆12Updated last year
- Integration of gut cell atlases☆27Updated 5 months ago
- ☆16Updated last year
- Repository to store code used for the analyses presented in "Defining the Regulatory Logic of Breast Cancer Using Single-Cell Epigenetic …☆17Updated 2 months ago
- Pan-cancer human brain metastases atlas at single-cell resolution☆18Updated 4 months ago
- ☆57Updated last year
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- ☆21Updated last year
- ☆37Updated 2 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆28Updated 8 months ago
- Draw phylogenetic trees of tumor evolution☆81Updated 2 years ago
- ☆32Updated last year
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Updated 5 months ago
- Functions for single cell data analysis☆32Updated 4 years ago
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Updated 5 months ago
- Collection of scripts for analysis of pan fetal immune atlas☆27Updated 2 years ago
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆49Updated 6 months ago
- Aligning gene expression trajectories of single-cell reference and query systems☆73Updated 9 months ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆18Updated 10 months ago
- ☆22Updated 2 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆37Updated 4 years ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆42Updated 2 years ago
- ☆14Updated last year
- These are code and scripts for MVI+ HCC scRNA-seq analysis.☆19Updated last year