Alternatives and similar repositories for RCC-spatial-mapping

Users that are interested in RCC-spatial-mapping are comparing it to the libraries listed below

• SeadonXing / PBMA
  Pan-cancer human brain metastases atlas at single-cell resolution
  ☆23Updated 9 months ago
• Xiaxy-XuLab / PanCAF
  ☆37Updated 3 years ago
• lfranzen / spatial-lung-fibrosis
  Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…
  ☆29Updated last year
• gabrielakinker / CCLE_heterogeneity
  ☆61Updated 2 years ago
• PaulingLiu / metaICB
  ☆22Updated 2 years ago
• liziyie / Onco-fetal-CAF-in-HCC
  ☆22Updated 2 years ago
• Teichlab / SKM_ageing_atlas
  ☆13Updated last year
• SunXQlab / scMLnet
  Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks
  ☆29Updated 4 years ago
• ZJU-UoE-CCW-LAB / scCDC
  single-cell Contamination Detection and Correction
  ☆15Updated 11 months ago
• HectorRDB / condiments
  Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression
  ☆29Updated last year
• ChanLab-UTSW / BreastCancer_Integrated
  ☆32Updated 10 months ago
• ZxZhou4150 / Redeconve
  Deconvolution of spatial transcriptomics at single-cell resolution
  ☆20Updated last year
• Coolgenome / PDAC
  ☆25Updated 10 months ago
• phillipnicol / scDist
  Robust identification of perturbed cell types in single-cell RNA-seq data
  ☆36Updated 2 months ago
• ImmucanWP7 / immucan-scdb
  ☆17Updated 2 years ago
• BKI-immuno-KNS / MANAscore
  A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types
  ☆11Updated 10 months ago
• KramannLab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆28Updated 3 years ago
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆32Updated 4 years ago
• Jiaxin-Fan / MuSiC2
  cell type deconvolution for multi-condition bulk RNA-seq data
  ☆30Updated 3 years ago
• Fraternalilab / sciCSR
  Single-Cell Inference of Class Switch Recombination
  ☆20Updated 2 months ago
• liziyie / scDVA
  An R shiny based tool used for single cell RNA-seq data visualization and analysis.
  ☆34Updated 5 years ago
• yanailab / PanCancer
  Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…
  ☆31Updated 3 years ago
• aet21 / SCENT
  Estimation of Single-Cell Potency with Single Cell Entropy
  ☆43Updated 2 years ago
• shyhihihi / MERCI
  MERCI for tracing of mitochondrion transfer between single cancer and T cells
  ☆26Updated last year
• Teichlab / Pan_fetal_immune
  Collection of scripts for analysis of pan fetal immune atlas
  ☆29Updated 3 years ago
• arc85 / singleseqgset
  Gene set enrichment analysis for single-cell RNAseq data
  ☆30Updated 2 years ago
• tiroshlab / Spatial_Glioma
  Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper
  ☆53Updated last year
• Teichlab / PanGIAtlas
  Integration of gut cell atlases
  ☆32Updated 2 months ago
• ZhoulabCPH / MVI_HCC
  These are code and scripts for MVI+ HCC scRNA-seq analysis.
  ☆19Updated 2 years ago
• bischofp / single_cell_lung_adenocarcinoma
  ☆32Updated 3 years ago