Alternatives and similar repositories for tronflow-alignment:

Users that are interested in tronflow-alignment are comparing it to the libraries listed below

• cortes-ciriano-lab / ReConPlot
  ☆21Updated 2 months ago
• scottgigante / haplotyped-methylome
  Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation
  ☆23Updated 5 years ago
• naumenko-sa / bioscripts
  a bucket of bioinformatics scripts
  ☆13Updated 3 months ago
• XiDsLab / TAGET
  ☆17Updated 2 years ago
• thelovelab / rnaseqDTU
  RNA-seq workflow: differential transcript usage
  ☆20Updated last year
• ctsa / svtools
  Tools for processing and analyzing structural variants.
  ☆32Updated 9 years ago
• zhongw2 / GeneTEFlow
  ☆23Updated 3 years ago
• bioinformatics-IBCH / Comparison-study-of-germline-CNV-calling-tools
  ☆16Updated 3 years ago
• LappalainenLab / lorals_paper_code
  ☆24Updated 2 years ago
• umccr / vcf_stuff
  📊Evaluating, filtering, comparing, and visualising VCF
  ☆27Updated last year
• Xinglab / rMATS-long
  ☆28Updated 2 months ago
• Oshlack / MINTIE
  Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.
  ☆34Updated 8 months ago
• AmpliconSuite / CoRAL
  Reconstruction of focal amplifications with long reads
  ☆18Updated this week
• asoltis / MutEnricher
  Somatic coding and non-coding mutation enrichment analysis for tumor WGS data
  ☆10Updated 3 years ago
• ccbiolab / svpluscnv
  Integrative analysis of complex structural variants
  ☆21Updated 4 years ago
• SziKayLeung / Whole_Transcriptome_Paper
  ☆18Updated 10 months ago
• Phillip-a-richmond / AnnotateVariants
  This is a pipeline for variant annotation in the diagnosis of rare genetic disorders. It relies on open source data and has instructions …
  ☆17Updated last year
• twlab / TEProf2Paper
  TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data
  ☆22Updated last year
• gagneurlab / splicemap
  ☆19Updated 4 months ago
• mortazavilab / cerberus
  ☆16Updated 7 months ago
• LappalainenLab / lorals
  ☆33Updated last year
• d3b-center / annoFuse
  Filter and prioritize fusion calls
  ☆20Updated 5 months ago
• adamewing / tldr
  Identify and annotate TE-mediated insertions in long-read sequence data
  ☆41Updated last year
• smithlabcode / abismal
  Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.
  ☆17Updated last week
• pk7zuva / Circle_finder
  Micro DNA identification
  ☆22Updated 3 years ago
• gimelbrantlab / Qllelic
  Enabling differential allele-specific analysis
  ☆11Updated 2 months ago
• czc / nb_distribution
  novoBreak: local assembly for breakpoint detection in cancer genomes
  ☆26Updated 6 years ago
• sanjaynagi / rna-seq-pop
  Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
  ☆18Updated 2 months ago
• mccoy-lab / t2t-variants
  Code associated with the manuscript "A complete reference genome improves analysis of human genetic variation".
  ☆17Updated 2 years ago
• adamewing / tebreak
  Find and characterise transposable element insertions
  ☆21Updated last year