Scalable Ultra-Sparse Bayesian PCA
☆32Feb 13, 2024Updated 2 years ago
Alternatives and similar repositories for susiepca
Users that are interested in susiepca are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Software to infer latent pleiotropic components from GWAS summary data☆18Jan 30, 2025Updated last year
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆34Aug 7, 2026Updated 2 months ago
- ☆13Feb 2, 2023Updated 3 years ago
- A faster and angrier package for EBMF.☆17Jul 1, 2026Updated 3 months ago
- Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …☆32Jun 18, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An R package implementing Mr.ASH method☆13Oct 31, 2023Updated 2 years ago
- Learn tissue-specificity and tissue-sharing of genetic regulation across 49 tissues using constraint matrix factorization model☆23Oct 9, 2020Updated 6 years ago
- A new model and algorithm for multivariate Bayesian variable selection regression.☆33Sep 28, 2026Updated 2 weeks ago
- Toy simulations and analyses of heritability and genetic differences☆11Jul 17, 2024Updated 2 years ago
- Quantitative Allele Specific Analysis of Reads. Joint genotyping & ASE inference for RNA-seq data☆29Feb 4, 2017Updated 9 years ago
- R package for fast maximum-likelihood estimation of mixture proportions using SQP.☆11Dec 21, 2023Updated 2 years ago
- Flexible, scalable, sc molQTL analyses using generalized linear models implemented in JAX☆20Updated this week
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆43Apr 26, 2024Updated 2 years ago
- Software for linkage disequilibrium graphical models☆18Apr 6, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Mediated Expression Score Regression (MESC)☆30Nov 4, 2025Updated 11 months ago
- RSparsePro for robust fine-mapping in the presence of LD mismatch☆16Jun 23, 2026Updated 3 months ago
- R package for Empirical Bayes Factor Analysis.☆54Dec 4, 2024Updated last year
- An R package for Poisson multivariate adaptive shrinkage.☆11Apr 15, 2024Updated 2 years ago
- Large-scale Bayesian variable selection for R and MATLAB.☆42Mar 22, 2023Updated 3 years ago
- PM520 Advanced Statistical Computing☆16Apr 3, 2026Updated 6 months ago
- QTL Discovery using Annotations☆29Dec 12, 2022Updated 3 years ago
- ☆29Sep 4, 2023Updated 3 years ago
- Non-negative Independent Factor Analysis for single cell RNA-seq☆12Feb 25, 2022Updated 4 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- polygenic scores using variational inference on GWAS summary statistics from multiple cohorts☆11Dec 7, 2022Updated 3 years ago
- Multivariate adaptive shrinkage methods used for analysis GTEx data in Urbut et al (2017).☆13Sep 25, 2017Updated 9 years ago
- Gene Environment Interaction Estimator☆14Sep 17, 2026Updated last month
- R package for "sum of single effects" regression.☆271Updated this week
- Toolkit for analyzing genetics data from admixed populations☆32Feb 13, 2025Updated last year
- R package for adaptive correlation and covariance matrix shrinkage.☆23Jan 23, 2019Updated 7 years ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆13Apr 3, 2025Updated last year
- Modeling and Analysis of (Statistical) Genetics data in python☆22Updated this week
- RSS: Regression with Summary Statistics☆51Sep 16, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Consistent Clusters for scRNA-seq☆12Oct 6, 2021Updated 5 years ago
- ☆35Jun 20, 2025Updated last year
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆57Sep 24, 2026Updated 3 weeks ago
- R package for bayesNMf, a computationally efficient Gibbs sampler for Bayesian Poisson NMF which automatically determines the number of l…☆12Oct 26, 2025Updated 11 months ago
- Finding surprising needles (=features) in haystacks (=single cell/spatial genomics data).☆13Aug 26, 2026Updated last month
- Fast algorithms for GLM-PCA.☆19Mar 12, 2025Updated last year
- Repo for Dynamic Statistical Comparisons project☆13Feb 5, 2024Updated 2 years ago