Alternatives and similar repositories for susiepca

Users that are interested in susiepca are comparing it to the libraries listed below

• stephenslab / mvsusieR
  A new model and algorithm for multivariate Bayesian variable selection regression.
  ☆23Updated last month
• mikelove / mrlocus
  Older repo for MRLocus. See new website for software usage guide:
  ☆15Updated 2 years ago
• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆27Updated 2 months ago
• willwerscheid / flashier
  A faster and angrier package for EBMF.
  ☆12Updated last month
• mancusolab / sushie
  Software to perform multi-ancestry SNP fine-mapping on molecular data
  ☆29Updated last month
• xqwen / torus
  QTL Discovery using Annotations
  ☆28Updated 3 years ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆48Updated 2 years ago
• karltayeb / cafeh
  ☆13Updated 2 years ago
• xinhe-lab / ctwas
  causal TWAS (cTWAS)
  ☆47Updated last week
• natsuhiko / PHM
  Pairwise Hierarchical Model
  ☆20Updated 3 years ago
• MalteThodberg / awesome-multitrait-gwas
  List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS
  ☆31Updated last month
• anna-neufeld / countsplit
  ☆21Updated 2 years ago
• single-cell-genetics / limix_qtl
  ☆20Updated 6 months ago
• sb452 / mr-code
  Code for implementing Mendelian randomization investigations
  ☆20Updated 10 years ago
• fauman / EGEA
  Every Gene Ever Annotated in published GWAS
  ☆50Updated 3 years ago
• yanglab-emory / TIGAR
  ☆22Updated 2 weeks ago
• mancusolab / twas_sim
  Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …
  ☆29Updated 2 years ago
• PejLab / Pantry
  Pan-transcriptomic phenotyping
  ☆18Updated 2 months ago
• Albluca / ElPiGraph.R
  An R package to construct Elastic Principal Graphs
  ☆24Updated 6 years ago
• xqwen / dap
  software package for integrative genetic association analysis
  ☆35Updated 2 years ago
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆53Updated 7 months ago
• hakyimlab / gtex-gwas-analysis
  ☆24Updated 4 years ago
• xihaoli / STAAR
  An R package for performing STAAR procedure in whole-genome sequencing studies
  ☆97Updated 11 months ago
• shz9 / magenpy
  Modeling and Analysis of (Statistical) Genetics data in python
  ☆16Updated 7 months ago
• awohns / ldgm
  Software for linkage disequilibrium graphical models
  ☆16Updated 9 months ago
• jessemzhang / tn_test
  post-clustering differential expression test
  ☆36Updated 6 years ago
• randel / MIND
  Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution
  ☆47Updated 2 years ago
• yaowuliu / ACAT
  ☆37Updated 4 years ago
• jxzb1988 / MMQTL
  MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…
  ☆12Updated 9 months ago
• jeffspence / vilma
  polygenic scores using variational inference on GWAS summary statistics from multiple cohorts
  ☆11Updated 3 years ago