Scalable Ultra-Sparse Bayesian PCA
☆32Feb 13, 2024Updated 2 years ago
Alternatives and similar repositories for susiepca
Users that are interested in susiepca are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Software to infer latent pleiotropic components from GWAS summary data☆17Jan 30, 2025Updated last year
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆34Aug 7, 2026Updated last month
- ☆13Feb 2, 2023Updated 3 years ago
- A faster and angrier package for EBMF.☆17Jul 1, 2026Updated 2 months ago
- Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …☆32Jun 18, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A new model and algorithm for multivariate Bayesian variable selection regression.☆32Aug 31, 2026Updated last week
- Learn tissue-specificity and tissue-sharing of genetic regulation across 49 tissues using constraint matrix factorization model☆23Oct 9, 2020Updated 5 years ago
- Toy simulations and analyses of heritability and genetic differences☆11Jul 17, 2024Updated 2 years ago
- R package for fast maximum-likelihood estimation of mixture proportions using SQP.☆11Dec 21, 2023Updated 2 years ago
- Flexible, scalable, sc molQTL analyses using generalized linear models implemented in JAX☆20Updated this week
- Software for linkage disequilibrium graphical models☆18Apr 6, 2025Updated last year
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆43Apr 26, 2024Updated 2 years ago
- Mediated Expression Score Regression (MESC)☆30Nov 4, 2025Updated 10 months ago
- R package for Empirical Bayes Factor Analysis.☆54Dec 4, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- PM520 Advanced Statistical Computing☆16Apr 3, 2026Updated 5 months ago
- Quantitative Allele Specific Analysis of Reads. Joint genotyping & ASE inference for RNA-seq data☆29Feb 4, 2017Updated 9 years ago
- QTL Discovery using Annotations☆29Dec 12, 2022Updated 3 years ago
- Non-negative Independent Factor Analysis for single cell RNA-seq☆12Feb 25, 2022Updated 4 years ago
- polygenic scores using variational inference on GWAS summary statistics from multiple cohorts☆11Dec 7, 2022Updated 3 years ago
- ☆29Sep 4, 2023Updated 3 years ago
- Multivariate adaptive shrinkage methods used for analysis GTEx data in Urbut et al (2017).☆12Sep 25, 2017Updated 8 years ago
- R package for "sum of single effects" regression.☆266Aug 31, 2026Updated last week
- R package for adaptive correlation and covariance matrix shrinkage.☆23Jan 23, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Toolkit for analyzing genetics data from admixed populations☆32Feb 13, 2025Updated last year
- RSS: Regression with Summary Statistics☆51Sep 16, 2024Updated last year
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆13Apr 3, 2025Updated last year
- Consistent Clusters for scRNA-seq☆12Oct 6, 2021Updated 4 years ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆57Jun 2, 2026Updated 3 months ago
- Fast algorithms for GLM-PCA.☆17Mar 12, 2025Updated last year
- Repo for Dynamic Statistical Comparisons project☆13Feb 5, 2024Updated 2 years ago
- Finding surprising needles (=features) in haystacks (=single cell/spatial genomics data).☆13Aug 26, 2026Updated last week
- Gene Environment Interaction Estimator☆13Dec 11, 2025Updated 8 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Large-scale Bayesian variable selection for R and MATLAB.☆42Mar 22, 2023Updated 3 years ago
- Stratified squared trans-ethnic genetic correlation☆14May 12, 2022Updated 4 years ago
- Code and simulations using interaction-LD score regression☆13Jul 2, 2024Updated 2 years ago
- STITCH - Sequencing To Imputation Through Constructing Haplotypes☆88Jan 19, 2026Updated 7 months ago
- RSparsePro for robust fine-mapping in the presence of LD mismatch☆16Jun 23, 2026Updated 2 months ago
- Implemention of Accurate estimation of SNP-heritability from biobank-scale data irrespective of genetic architecture. (Nature Genetics 20…☆15Sep 5, 2019Updated 7 years ago
- logistic factor analysis☆16Jan 29, 2026Updated 7 months ago