lukejoconnor / LCV
Software implementing the Latent Causal Variable Model
☆63Updated 4 years ago
Alternatives and similar repositories for LCV:
Users that are interested in LCV are comparing it to the libraries listed below
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆48Updated 4 years ago
- Mendelian Randomization with Biomarker Associations for Causality with Outcomes☆24Updated 6 years ago
- An R package for Mendelian Randomization☆37Updated last year
- R package for CAUSE☆54Updated last year
- Pair-wise conditional analysis and colocalisation☆40Updated 11 months ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆29Updated 11 months ago
- GWAS for survival analysis in large cohorts☆21Updated 8 months ago
- Power calculations for Mendelian Randomisation☆22Updated 7 years ago
- Non-linear Mendelian randomization☆54Updated last year
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆26Updated last year
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆87Updated last year
- Data objects for various sets of instruments☆44Updated 4 years ago
- non-linear MR for semi-summarized data☆23Updated 10 months ago
- Reading, querying and writing GWAS summary data in VCF format☆77Updated 11 months ago
- LDlinkR☆58Updated last year
- corrplot of LDSC genetic correlation results☆51Updated 3 years ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆19Updated 2 years ago
- Hypothesis Prioritisation in multi-trait Colocalization☆52Updated last year
- R package for performing Mendelian Randomization using mixture models☆24Updated 5 years ago
- lhcMR☆25Updated last year
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 6 years ago
- Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper☆18Updated last year
- R package for working in the UK Biobank Research Analysis Platform (RAP)☆56Updated this week
- ☆23Updated 4 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆31Updated 4 years ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆33Updated 3 years ago
- ☆29Updated 6 years ago
- ☆16Updated 2 years ago
- ☆10Updated 4 years ago