privefl / bigsnprLinks
R package for the analysis of massive SNP arrays.
☆210Updated 2 months ago
Alternatives and similar repositories for bigsnpr
Users that are interested in bigsnpr are comparing it to the libraries listed below
Sorting:
- R-package for structural equation modeling based on GWAS summary data☆250Updated 2 months ago
- R package for "sum of single effects" regression.☆228Updated last month
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆99Updated 5 months ago
- LASSO for GWAS with summary statistics☆78Updated 5 years ago
- R package for quality control of plink genetic datasets☆59Updated last week
- An R package for performing STAAR procedure in whole-genome sequencing studies☆95Updated 8 months ago
- R package for working in the UK Biobank Research Analysis Platform (RAP)☆68Updated 3 months ago
- An R package for creating Q-Q and manhattan plots from GWAS results☆170Updated this week
- Repo for the R package coloc☆179Updated 3 months ago
- Linking GWAS data to analytical tools in R☆148Updated 3 years ago
- A list of awesome tools for complex trait genetics.☆76Updated 9 months ago
- Codebook from my GWAS cookbook☆193Updated 3 years ago
- Learn and validate subtypes from multiple traits☆20Updated 4 years ago
- An R package for multivariate adaptive shrinkage.☆92Updated 11 months ago
- Polygenic prediction via continuous shrinkage priors☆190Updated 11 months ago
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆92Updated 2 years ago
- A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores☆200Updated last year
- Brings bulk and pseudobulk transcriptomics to the tidyverse☆174Updated 3 weeks ago
- ☆195Updated 3 years ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆199Updated 2 years ago
- R package to estimate q-values and false discovery rate quantities.☆117Updated 2 years ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆125Updated 10 months ago
- LDlinkR☆61Updated last year
- R interface to the IEU GWAS database API☆103Updated 3 months ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆151Updated last week
- LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.☆117Updated 2 years ago
- 🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R htt…☆157Updated 2 months ago
- High-definition likelihood inference of genetic correlations (HDL)☆123Updated 4 months ago
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆87Updated 3 weeks ago
- Every Gene Ever Annotated in published GWAS☆49Updated 2 years ago