privefl / bigsnprLinks
R package for the analysis of massive SNP arrays.
☆208Updated last week
Alternatives and similar repositories for bigsnpr
Users that are interested in bigsnpr are comparing it to the libraries listed below
Sorting:
- R-package for structural equation modeling based on GWAS summary data☆234Updated last week
- R package for "sum of single effects" regression.☆217Updated 3 weeks ago
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆97Updated last month
- LASSO for GWAS with summary statistics☆74Updated 4 years ago
- An R package for performing STAAR procedure in whole-genome sequencing studies☆93Updated 5 months ago
- R package for quality control of plink genetic datasets☆59Updated last week
- Linking GWAS data to analytical tools in R☆142Updated 3 years ago
- LDlinkR☆59Updated last year
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆90Updated last year
- High-definition likelihood inference of genetic correlations (HDL)☆118Updated 3 weeks ago
- An R package for creating Q-Q and manhattan plots from GWAS results☆169Updated last year
- An R package for multivariate adaptive shrinkage.☆92Updated 8 months ago
- ☆193Updated 3 years ago
- R package to estimate q-values and false discovery rate quantities.☆117Updated last year
- Repo for the R package coloc☆169Updated 2 months ago
- Polygenic prediction via continuous shrinkage priors☆180Updated 7 months ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆190Updated 2 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆45Updated last year
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆147Updated last year
- R interface to the IEU GWAS database API☆96Updated 3 weeks ago
- R package for working in the UK Biobank Research Analysis Platform (RAP)☆64Updated last week
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆121Updated 7 months ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆66Updated 9 months ago
- Codebook from my GWAS cookbook☆192Updated 3 years ago
- Learn and validate subtypes from multiple traits☆20Updated 4 years ago
- Brings bulk and pseudobulk transcriptomics to the tidyverse☆174Updated 3 weeks ago
- LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.☆115Updated 2 years ago
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆83Updated this week
- 🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R htt…☆153Updated 9 months ago
- GCTA software☆98Updated last week