privefl / bigsnpr
R package for the analysis of massive SNP arrays.
☆200Updated 3 weeks ago
Alternatives and similar repositories for bigsnpr:
Users that are interested in bigsnpr are comparing it to the libraries listed below
- R-package for structural equation modeling based on GWAS summary data☆224Updated last month
- R package for "sum of single effects" regression.☆203Updated last month
- ☆193Updated 2 years ago
- R package for quality control of plink genetic datasets☆58Updated 2 months ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆183Updated last year
- Repo for the R package coloc☆164Updated this week
- High-definition likelihood inference of genetic correlations (HDL)☆108Updated last week
- Codebook from my GWAS cookbook☆190Updated 2 years ago
- An R package for performing STAAR procedure in whole-genome sequencing studies☆92Updated last month
- Polygenic prediction via continuous shrinkage priors☆169Updated 4 months ago
- LASSO for GWAS with summary statistics☆74Updated 4 years ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆146Updated 10 months ago
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆96Updated last year
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆105Updated 3 months ago
- A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores☆192Updated 7 months ago
- An R package for multivariate adaptive shrinkage.☆90Updated 4 months ago
- An R package for creating Q-Q and manhattan plots from GWAS results☆166Updated last year
- A list of awesome tools for complex trait genetics.☆69Updated 2 months ago
- ☆61Updated 9 months ago
- Statistical tools for Quantitative Genetic Analyses☆36Updated last week
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆86Updated last year
- methods for functional summary-based imputation☆81Updated 2 years ago
- Genotype-based Prediction (GenoPred)☆72Updated this week
- ☆97Updated 2 years ago
- corrplot of LDSC genetic correlation results☆50Updated 3 years ago
- Linking GWAS data to analytical tools in R☆135Updated 2 years ago
- Main ricopili repo for public releases☆45Updated 3 weeks ago
- Visualization of Colocalization Between eQTL and GWAS Data☆80Updated 2 years ago
- Learn and validate subtypes from multiple traits☆20Updated 3 years ago
- GCTA software☆93Updated 2 weeks ago