brielin / Popcorn
Software for estimating correlation of trait effect sizes across populations
☆37Updated last year
Related projects: ⓘ
- Fast, integrative fine mapping with functional data☆55Updated 5 years ago
- ☆32Updated 3 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆39Updated 6 years ago
- Enhanced version of the FastQTL QTL mapper☆55Updated last year
- FOCUS: Fine-mapping Of CaUsal gene Sets☆43Updated last year
- Sequence kernel association test (SKAT)☆41Updated 10 months ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆45Updated 2 months ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆23Updated 3 months ago
- Harmonise GWAS summary statistics against a reference VCF☆38Updated 3 years ago
- An R package for creating mirrored Manhattan plots☆17Updated last year
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆17Updated 2 weeks ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆10Updated 2 years ago
- Mediated Expression Score Regression (MESC)☆26Updated 2 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆27Updated 8 months ago
- ☆19Updated last year
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆21Updated last month
- Scripts to run mQTL analyses as described in the ARIES mQTL paper☆9Updated 8 years ago
- Make LocusZoom-like plots with your own LD matrix.☆37Updated 2 years ago
- Functional genomics and genome-wide association studies☆64Updated 6 years ago
- ☆17Updated 6 months ago
- corrplot of LDSC genetic correlation results☆44Updated 2 years ago
- Main ricopili repo for public releases☆42Updated 4 years ago
- ☆61Updated 2 years ago
- Colocalization analysis of genetic association signals☆45Updated this week
- Read PLINK BED/BIM/FAM files into R☆39Updated 3 years ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆47Updated 9 months ago
- ☆42Updated 3 weeks ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆31Updated 4 years ago
- ☆40Updated 6 years ago
- ☆32Updated last year