brielin / Popcorn
Software for estimating correlation of trait effect sizes across populations
☆46Updated last month
Alternatives and similar repositories for Popcorn
Users that are interested in Popcorn are comparing it to the libraries listed below
Sorting:
- ☆35Updated 4 years ago
- Fast, integrative fine mapping with functional data☆58Updated 5 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 7 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆31Updated last year
- Analyses conducting GWAS across the UKBB diverse superpopulations☆50Updated 7 months ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 3 years ago
- Colocalization analysis of genetic association signals☆52Updated this week
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆28Updated 11 months ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- Sequence kernel association test (SKAT)☆49Updated 3 months ago
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆17Updated 8 months ago
- ☆32Updated last year
- harmonization, liftover, and imputation of summary statistics from GWAS☆32Updated 4 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- ☆22Updated last year
- ☆19Updated last year
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆19Updated 2 years ago
- GWAS Summary Statistics Data Harmonisation☆23Updated 4 months ago
- Genotype-based Prediction (GenoPred)☆72Updated this week
- Partners Biobank genomics data QC☆26Updated 5 years ago
- Main ricopili repo for public releases☆47Updated last month
- methods for functional summary-based imputation☆83Updated 2 years ago
- Make LocusZoom-like plots with your own LD matrix.☆40Updated 2 years ago
- Scripts to run mQTL analyses as described in the ARIES mQTL paper☆9Updated 9 years ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆60Updated 7 months ago
- Source code of FUMA GWAS web application☆57Updated last year
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆53Updated last year
- Cross-population polygenic prediction☆80Updated 5 months ago
- Statistical tools for Quantitative Genetic Analyses☆36Updated last week
- Regional association plots☆25Updated last year