Software for estimating correlation of trait effect sizes across populations
☆59May 30, 2025Updated last year
Alternatives and similar repositories for Popcorn
Users that are interested in Popcorn are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- GPA: Genetic analysis incorporating Pleiotropy and Annotation☆16Feb 27, 2020Updated 6 years ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Oct 6, 2023Updated 2 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆43May 2, 2018Updated 8 years ago
- user-friendly pipeline for GWAS fine-mapping☆14Mar 9, 2025Updated last year
- LD Score Regression (LDSC)☆796Jan 16, 2026Updated 6 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆29Jul 30, 2025Updated last year
- Genetics ToolboX R package☆32Feb 10, 2020Updated 6 years ago
- ☆64Jun 24, 2025Updated last year
- Tissue-Gene Fine-Mapping☆29Mar 20, 2025Updated last year
- ☆20Aug 7, 2025Updated last year
- ☆46Jul 5, 2026Updated last month
- ☆40Jan 20, 2021Updated 5 years ago
- An R package for plotting GWAS results from the GAPIT package☆14Updated this week
- ☆98Jul 21, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- DENTIST (Detecting Errors iN analyses of summary staTISTics) is a QC tool for summary-data-based analyses.☆29Oct 5, 2023Updated 2 years ago
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆36Jan 28, 2026Updated 6 months ago
- Calculate AUC based on GWAS summary statistics only☆10Jun 29, 2018Updated 8 years ago
- ☆15Dec 8, 2023Updated 2 years ago
- Cross-population fine-mapping☆46Dec 7, 2024Updated last year
- R-package for structural equation modeling based on GWAS summary data☆294Updated this week
- An accurate and efficient colocalization method accounting for multiple causal signals☆14Jun 3, 2024Updated 2 years ago
- Stratified squared trans-ethnic genetic correlation☆14May 12, 2022Updated 4 years ago
- Create Regional Association Plots☆13May 27, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- FLAMES: Accurate gene prioritization in GWAS loci☆65Dec 16, 2025Updated 7 months ago
- ☆22Aug 2, 2025Updated last year
- ☆90Jul 28, 2026Updated last week
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆214Jul 6, 2023Updated 3 years ago
- Fast, integrative fine mapping with functional data☆64Aug 22, 2019Updated 6 years ago
- ☆36Dec 19, 2023Updated 2 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆30Aug 2, 2022Updated 4 years ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆137Dec 9, 2024Updated last year
- Non-linear Mendelian randomization☆56Jan 4, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆18Aug 30, 2024Updated last year
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆34Updated this week
- FOCUS: Fine-mapping Of CaUsal gene Sets☆48Aug 30, 2023Updated 2 years ago
- High-definition likelihood inference of genetic correlations (HDL)☆143May 8, 2026Updated 3 months ago
- Causal Mixture Model for GWAS summary statistics☆102Dec 17, 2025Updated 7 months ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆32Jul 29, 2026Updated last week
- ☆31Oct 18, 2021Updated 4 years ago