RajLabMSSM / catalogueRLinks
Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).
☆13Updated 2 years ago
Alternatives and similar repositories for catalogueR
Users that are interested in catalogueR are comparing it to the libraries listed below
Sorting:
- Primo☆16Updated 3 years ago
- Regional association plots☆26Updated last year
- Genetics ToolboX R package☆32Updated 5 years ago
- ☆18Updated 7 years ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆33Updated 4 years ago
- A collection of various utilities for GWAS summary statistics☆28Updated last year
- Estimate genetic correlation using predicted expression☆22Updated 7 years ago
- Regional association plots☆25Updated last year
- GENI plots to visualise results from genome-wide association studies☆29Updated 9 months ago
- An R package for generating comparative regional association plots☆18Updated 6 months ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆37Updated 2 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated 2 years ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆32Updated last year
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆24Updated 3 years ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆27Updated last week
- Colocalization analysis of genetic association signals☆52Updated last month
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆18Updated 2 years ago
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆20Updated 4 years ago
- Fine-mapping method only using summary statistics☆19Updated 9 years ago
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆21Updated 2 weeks ago
- Tissue of ACTion scores for Investigating Complex trait-Associated Loci☆13Updated 4 years ago
- DENTIST (Detecting Errors iN analyses of summary staTISTics) is a QC tool for summary-data-based analyses.☆26Updated last year
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆30Updated last year
- ☆33Updated 2 years ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆23Updated 5 years ago
- ☆21Updated 2 years ago
- ☆16Updated 4 months ago
- ☆20Updated 10 months ago
- Code supporting analyses in paper on fine-mapping AD loci☆15Updated 4 years ago