Nealelab / UKBB_ldsc_scripts
Scripts used for generating Neale Lab UKB results
☆19Updated 2 years ago
Alternatives and similar repositories for UKBB_ldsc_scripts:
Users that are interested in UKBB_ldsc_scripts are comparing it to the libraries listed below
- Create LocusZoom-style plots in R.☆21Updated last year
- Primo☆16Updated 3 years ago
- Sample code for ldsc analyses in UKBB☆30Updated last year
- ☆32Updated last year
- Tool for GWAS summary-level data analysis☆26Updated 4 years ago
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆33Updated this week
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆13Updated 2 years ago
- genetic correlation between phenotypes in the UK biobank☆12Updated 10 months ago
- Genetics ToolboX R package☆31Updated 4 years ago
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆17Updated 4 months ago
- ☆17Updated 3 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- Stratified squared trans-ethnic genetic correlation☆12Updated 2 years ago
- Older repo for MRLocus. See new website for software usage guide:☆15Updated last year
- Adding random effects model to the METAL software☆12Updated last year
- ☆18Updated 7 years ago
- A rapido and lightweight method for PGS computation☆13Updated 3 months ago
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆19Updated 3 years ago
- software package for integrative genetic association analysis☆34Updated last year
- Convert GWAS sumstat files into a common format with a common reference for positions, rsids and effect alleles.☆13Updated last month
- Tissue of ACTion scores for Investigating Complex trait-Associated Loci☆13Updated 3 years ago
- ☆21Updated 2 months ago
- ☆18Updated 2 years ago
- Estimate genetic correlation using predicted expression☆21Updated 6 years ago
- Learn and validate subtypes from multiple traits☆20Updated 3 years ago
- Software to help identify overlap between association scan results and GWAS hit catalogs.☆15Updated 2 years ago
- A collection of various utilities for GWAS summary statistics☆26Updated 8 months ago
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆18Updated last year
- Specification for the GWAS-VCF format (manuscript in preparation)☆23Updated 3 years ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated 7 months ago