python plotly Circos from VCF
☆42Jun 20, 2024Updated last year
Alternatives and similar repositories for vcf2circos
Users that are interested in vcf2circos are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Highly Open Workflow for Annotation & Ranking toward genomic variant Discovery☆12Mar 4, 2026Updated 2 months ago
- A customizable genetic variants file format converter.☆11Apr 13, 2026Updated 3 weeks ago
- A simple script to create a customizable html file from an AnnotSV output.☆21Apr 20, 2026Updated 2 weeks ago
- A nextflow pipeline for calling exome CNVs☆14Feb 24, 2026Updated 2 months ago
- Short Tandem Repeat disease loci resource☆29Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An analysis pipeline for long-reads from both PacBio and Oxford Nanopore Technologies (ONT), written in Nextflow.☆64Apr 30, 2026Updated last week
- JTK -- a regional diploid genome assembler☆26Apr 22, 2026Updated 2 weeks ago
- Wally: Visualization of aligned sequencing reads and contigs☆124Oct 9, 2025Updated 7 months ago
- alternative splicing analysis pipeline☆20Apr 9, 2021Updated 5 years ago
- A web-browser app to visualise, interpret and prioritise genomic/transcriptomic structural variations (SVs) of multiple samples.☆14Updated this week
- Annotation and Ranking of Structural Variation☆295Apr 16, 2026Updated 3 weeks ago
- ☆36Mar 31, 2026Updated last month
- Structural variant (SV) analysis tools☆41Jul 1, 2024Updated last year
- A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data☆13Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Program for finding horizontal gene transfer using BLAST result☆11May 26, 2023Updated 2 years ago
- ☆35Aug 18, 2024Updated last year
- De novo tandem repeat calling from PacBio HiFi data☆19Dec 5, 2025Updated 5 months ago
- VEP-like tool for sequence ontology and HGVS annotation of VCF files☆28May 2, 2026Updated last week
- POSTRE: Prediction Of STRuctural variant Effects☆28Apr 24, 2026Updated 2 weeks ago
- Copy number variant caller and depth visualization utility for PacBio HiFi reads☆49Oct 22, 2024Updated last year
- Plot structural variant signals from many BAMs and CRAMs☆567Jul 13, 2024Updated last year
- A standalone and free application to explore genetics variations from VCF file☆108Mar 31, 2026Updated last month
- A python tool to detect internal tandem duplication with robust variant allele frequency estimation☆12Feb 3, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- nf-test utility functions☆12Mar 5, 2026Updated 2 months ago
- BAM Statistics, Feature Counting and Annotation☆154Apr 16, 2026Updated 3 weeks ago
- visual analysis of your VCF files☆40Dec 3, 2022Updated 3 years ago
- ☆13May 2, 2025Updated last year
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- EndHic is a fast and easy-to-use Hi-C scaffolding tool, using the Hi-C links from contig end regions instead of whole contig regions to a…☆26Mar 11, 2023Updated 3 years ago
- Read-based phasing of genomic variants, also called haplotype assembly☆415Dec 31, 2025Updated 4 months ago
- Toolset for SV simulation, comparison and filtering☆416Dec 1, 2023Updated 2 years ago
- PhenoSV: Interpretable phenotype-aware model for the prioritization of genes affected by structural variants.☆17Feb 11, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆14Oct 17, 2024Updated last year
- A deep learning-based SNP calling method to identify SNPs based on low-coverage Nanopore sequencing reads.☆21Nov 20, 2022Updated 3 years ago
- Combine structural variation outputs from long sequencing reads into a superior call set☆18Aug 6, 2025Updated 9 months ago
- Bacterial typing pipeline for clinical NGS data. Written in NextFlow, Python & Bash.☆14Updated this week
- Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research☆46Apr 30, 2026Updated last week
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆27Apr 17, 2026Updated 3 weeks ago
- Interactive multiscale visualization for structural variation in human genomes☆72Updated this week