JasonAHendry / multiplyLinks
Multiplex PCR design, in silico
☆19Updated 11 months ago
Alternatives and similar repositories for multiply
Users that are interested in multiply are comparing it to the libraries listed below
Sorting:
- Generate unique KMERs for every contig in a FASTA file☆49Updated 3 years ago
- ♥ Fast and Accurate Estimation of Evolutionary Distances☆29Updated 9 months ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
- MegaPath-Nano: Accurate Compositional Analysis and Drug-level Antimicrobial Resistance Detection Software for Oxford Nanopore Long-read M…☆13Updated 3 years ago
- ☆11Updated 11 months ago
- kASA - k-Mer Analysis of Sequences based on Amino acid-like encoding☆23Updated 2 years ago
- genomic alignment similarity search tool☆18Updated 8 months ago
- Visualize whole genome alignments as linear maps☆74Updated 2 weeks ago
- compare sequences to a shared root reference sequence.☆24Updated 4 years ago
- Phylogeny Enhanded Prediction of PAN-genome☆43Updated 5 years ago
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- Mash MinHash search your nucleotide sequences against a NCBI RefSeq genomes database☆43Updated 5 years ago
- Correcting errors in noisy long reads using variation graphs☆50Updated 3 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆51Updated 6 years ago
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated 2 years ago
- Improve the quality of a denovo assembly by scaffolding and gap filling☆57Updated 5 years ago
- ☆29Updated 4 years ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆39Updated 4 months ago
- Gene-flank analysis tool☆37Updated last year
- MutTui pipeline to reconstruct mutational spectra for bacterial and viral datasets☆33Updated last year
- Find Unique genomic Regions☆32Updated last week
- A snakemake pipeline to assembly, polishing, correction and quality check from Oxford nanopore reads.☆36Updated 10 months ago
- Fast and space-efficient taxonomic classification of long reads☆43Updated 5 months ago
- Toolkit for preparing genomes for submission to NCBI☆29Updated 4 years ago
- A method of assessing sequence complexity based on kmer frequencies☆33Updated 7 years ago
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆77Updated 9 years ago
- ☆26Updated 7 years ago
- More realistic simulator for genomic DNA sequences from Illumina machines that achieves a similar k-mer spectrum as the original☆51Updated 3 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆35Updated 6 years ago
- Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.☆48Updated this week