Phillip-a-richmond / PrecisionHealthVirtualEnvironmentLinks
This is a virtual environment which contains databases, software, workflows, and workshops for Precision Health Data Analysis.
☆22Updated 2 years ago
Alternatives and similar repositories for PrecisionHealthVirtualEnvironment
Users that are interested in PrecisionHealthVirtualEnvironment are comparing it to the libraries listed below
Sorting:
- R package for testing and visualizing gene list overlaps☆19Updated 9 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47Updated 2 years ago
- Co-expression network management based on WGCNA + k-means☆21Updated 4 years ago
- An r package that works as a wrapper to homologene☆46Updated last year
- Inferring gene co-expression networks from single cell gene expression data☆28Updated 3 years ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆23Updated 3 months ago
- ☆18Updated 3 years ago
- Identify and correct invalid gene symbols☆59Updated 10 months ago
- Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.☆60Updated 7 months ago
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆45Updated 2 weeks ago
- Course Materials for Genomics Data Mining☆22Updated 3 weeks ago
- List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS☆31Updated 5 months ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- The MBatch R package and Docker image are designed to help assess and correct for batch effects.☆16Updated last year
- ☆48Updated last year
- Pathway-Level Information Extractor (PLIER): a generative model for gene expression data☆55Updated last year
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆42Updated 3 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 3 weeks ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last year
- ☆35Updated 2 years ago
- Phenome Exome Association and Correlation Of Key phenotypes☆29Updated 4 years ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆67Updated last month
- ConsensusTME Gene Sets and R Script☆39Updated last year
- scDataviz: single cell dataviz and downstream analyses☆63Updated 4 years ago
- ☆50Updated this week
- LDlinkR☆60Updated last year
- Pathway-based trajectory inference method for time-series scRNAseq data☆25Updated 4 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Updated last week
- R package for plotting 3D graphical visualization of multi-omics data.☆23Updated 3 years ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆55Updated 4 years ago