☆23Jan 7, 2026Updated 2 months ago
Alternatives and similar repositories for tidyCoverage
Users that are interested in tidyCoverage are comparing it to the libraries listed below
Sorting:
- Analyzing Hi-C data in R with HiCExperiment objects☆16Mar 18, 2025Updated last year
- Orchestrating Hi-C analysis with Bioconductor☆11Jul 11, 2025Updated 8 months ago
- R package to easily generate "V-plots" of paired-end sequencing data over regions of interest☆11Dec 1, 2023Updated 2 years ago
- Blood Transcription Modules for interpreting blood transcriptomics data☆11Nov 25, 2024Updated last year
- R package to draw syntenic plots in 3 different styles☆45Feb 2, 2026Updated last month
- snpless-nf - A Nextflow pipeline for time-course analysis with bacterial NGS whole-genome data.☆14May 12, 2024Updated last year
- https://www.biorxiv.org/content/10.1101/2023.07.03.547592v2☆32Jan 22, 2025Updated last year
- ☆17Sep 28, 2022Updated 3 years ago
- R package for comparison of synteny conservation at the genome-wide scale.☆14Jun 6, 2024Updated last year
- multiGenomicContext is a pipeline to see your protein in many genomic context as much as gbk you have.☆11Oct 10, 2022Updated 3 years ago
- A command line tool (in Kotlin/JVM) for intuitively visualizing BAM alignments. (Currently unmaintained)☆11Jan 7, 2024Updated 2 years ago
- A tidyverse and grammar of graphics powered line traces visualizer☆30Sep 3, 2025Updated 6 months ago
- ☆42May 19, 2025Updated 10 months ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Jul 5, 2021Updated 4 years ago
- A curated collection of free resources to help the aspiring computational biologist learn about the R programming language.☆32Nov 26, 2024Updated last year
- Python Books☆10Dec 29, 2015Updated 10 years ago
- ☆18Apr 20, 2025Updated 11 months ago
- ☆25Dec 5, 2025Updated 3 months ago
- Beautify the phylogenetic tree using one Excel sheet only☆16Mar 2, 2024Updated 2 years ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆17Oct 25, 2024Updated last year
- tools in python and R for analyzing biological count data, especially from single cell RNAseq☆22Feb 1, 2024Updated 2 years ago
- gghic makes visualization of Hi-C/-like data easily in R☆25Jan 23, 2026Updated last month
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Dec 8, 2021Updated 4 years ago
- A pipeline for identifying conserved topologically associating domain boundaries among multiple species.☆16Jun 17, 2025Updated 9 months ago
- West Coast Dream Team Whole Genome Bisulfite Sequencing☆15Nov 7, 2025Updated 4 months ago
- ☆16May 21, 2017Updated 8 years ago
- ☆19Jul 17, 2024Updated last year
- Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data☆22Nov 17, 2021Updated 4 years ago
- Implementation of the matrixStats API for sparse matrices☆54Apr 2, 2025Updated 11 months ago
- Develop and host GitHub actions for Bioconductor☆11Apr 22, 2021Updated 4 years ago
- Extract Sequence from Genome According to Annotation File☆40Apr 16, 2025Updated 11 months ago
- Structural variant pipeline☆18Jun 25, 2020Updated 5 years ago
- Useful bash one-liners for bioinformatics.☆10Jun 26, 2017Updated 8 years ago
- ☆57Feb 14, 2022Updated 4 years ago
- A tooL for Prokaryotic Phylogeny And Clustering Analysis☆13Jul 28, 2025Updated 7 months ago
- Generate IGV style locus tracks from bigWig files in R☆183Oct 28, 2024Updated last year
- Mycobacterium tuberculosis complex lineage typing☆10Jun 22, 2025Updated 8 months ago
- Biwhitened PCA☆14Updated this week
- Mycobacterium tuberculosis genomic analysis from Nanopore sequencing data☆14Jun 12, 2024Updated last year