Search for a set of compatible indexes for your sequencing experiment
☆11Sep 6, 2019Updated 6 years ago
Alternatives and similar repositories for checkMyIndex
Users that are interested in checkMyIndex are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.☆51Aug 20, 2018Updated 7 years ago
- A Nextflow pipeline to play Doom☆10Dec 1, 2025Updated 8 months ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Sep 20, 2017Updated 8 years ago
- Our laboratory repository☆11Jan 12, 2021Updated 5 years ago
- Some of the stuff I am currently using for my Chinese studies☆13Dec 1, 2018Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- CLI tool to verify workflow reproducibility☆17Jan 29, 2024Updated 2 years ago
- Test data for MultiQC.☆24May 12, 2026Updated 3 months ago
- Allele frequency filter app☆14May 4, 2022Updated 4 years ago
- Bioinformatics pipeline to identify differentially active transcription factors between conditions using expression and epigenetic data☆14Mar 12, 2024Updated 2 years ago
- Rust coder/decoder for Nucleotide Archival Format (NAF) files.☆10Jan 31, 2025Updated last year
- Tool for the Automation of Cleanup and Analyses: tools for projects and data management at NGI Stockholm☆14Jun 26, 2026Updated last month
- ⚠️Deprecated. Download Chinese Podcasts, so I can subscribe to them use my favorite podcast client.☆12Apr 29, 2016Updated 10 years ago
- ☆15Jun 8, 2023Updated 3 years ago
- A VSCode extension pack for nf-core developers.☆15Mar 7, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- pipeline for dog WGS alignment☆15Jun 27, 2023Updated 3 years ago
- Pipeline to generate variant catalogues, a list of variants and their frequencies in a population, from whole genome sequences.☆13Jul 28, 2026Updated 2 weeks ago
- Swedish pathogens portal☆13Aug 4, 2026Updated last week
- ☆16Jun 3, 2025Updated last year
- Stochastic Testing and Input Manipulation for Unbiased Learning Systems☆31Jul 27, 2026Updated 2 weeks ago
- Template for building a small workflow in Nextflow☆17May 2, 2022Updated 4 years ago
- lz-string for python 2/3☆12Oct 12, 2023Updated 2 years ago
- POC Nextflow pipeline to run the Chai-1, SOTA model for biomolecular structure prediction☆11Jul 21, 2026Updated 3 weeks ago
- Docker containers for bioinformatics with a small footprint☆23May 25, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- nf-core/references is a bioinformatics pipeline that build references, for multiple use cases☆22Jul 27, 2026Updated 2 weeks ago
- ActiveDriverDB☆12May 1, 2023Updated 3 years ago
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆28Jun 25, 2026Updated last month
- Test sets and pipeline scripts for pan-genomic graph analysis☆18Jan 30, 2025Updated last year
- A mosaic genome painting tool for plant genomes☆18May 6, 2026Updated 3 months ago
- Please consider using/contributing to https://github.com/nf-core/sarek☆18Jan 3, 2019Updated 7 years ago
- A standalone end-to-end data analysis pipeline for Duplex Sequencing☆23Oct 25, 2023Updated 2 years ago
- A server for maintaining high-throughput sequencing QC data☆13Aug 5, 2025Updated last year
- Whole Genome Sequenceing Structural Variation Pipelines☆18Apr 4, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A long read simulator based on badread idea☆23Oct 7, 2022Updated 3 years ago
- Builds a PEP from SRA or GEO accessions☆55Apr 12, 2026Updated 4 months ago
- Graph-aware Retrieval of Selective Sweeps☆22Sep 17, 2024Updated last year
- Source files for online resources of Bioinformatics of Infectious Diseases course☆22May 21, 2020Updated 6 years ago
- A web application framework for analysis and visualization of High throughput Sequencing metagenomic data☆10Nov 21, 2016Updated 9 years ago
- Supplementary files for paper "Detection and removal of barcode swapping in single-cell RNAseq".☆11Jul 5, 2018Updated 8 years ago
- less like viewer for fastq files☆26Jul 31, 2026Updated 2 weeks ago