Generation and updating of protein families
☆23Oct 9, 2026Updated this week
Alternatives and similar repositories for proteinfamilies
Users that are interested in proteinfamilies are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pipeline for identifying, annotation, and quantifying phage sequences in (meta)-genomic sequences.☆19Oct 7, 2026Updated last week
- nf-test utility functions☆13Sep 29, 2026Updated 2 weeks ago
- ☆21Feb 15, 2025Updated last year
- ☆25Sep 22, 2026Updated 3 weeks ago
- A Nextflow pipeline that creates reliable, structure-informed MSAs of thousands of protein sequences which can supplement structural info…☆11Jul 14, 2026Updated 3 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- genome annotation (RNAseq and TE) pipeline (draft)☆13Sep 17, 2026Updated 3 weeks ago
- Params validation plugin for Nextflow pipelines☆48Aug 7, 2024Updated 2 years ago
- Protein 3D structure prediction pipeline☆115Updated this week
- Modular Genome Assembly, Annotation and Assessment Pipeline☆23Mar 16, 2026Updated 6 months ago
- Nail is an Alignment Inference tooL☆71Sep 29, 2026Updated 2 weeks ago
- Finding patch of conserved amino acid sites in 3D structure☆14Apr 13, 2025Updated last year
- A nf-core pipeline for untargeted whole genome reconstruction with iSNV detection from metagenomic samples.☆42Updated this week
- FuncFetch workflow scripts☆15Jun 9, 2025Updated last year
- Scripts to generate and analyze afdb clusters☆11Sep 15, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Parallelised and automated construction of metagenomic classifier databases of different tools☆22Updated this week
- lncRNA-Py is a development package for applying machine learning and deep learning to the problem of lncRNA classification, i.e. predicti…☆12Jan 24, 2025Updated last year
- CLI tool to verify workflow reproducibility☆17Jan 29, 2024Updated 2 years ago
- A pipeline to simulate sequencing reads, such as Amplicon, Target Capture, Metagenome, and Whole genome data.☆35Oct 7, 2026Updated last week
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 5 years ago
- ESM-driven Pocket Cross Similarity☆18Aug 11, 2025Updated last year
- Assign genotypes to Salmonella Paratyphi A isolates using their whole-genome data.☆10Mar 6, 2025Updated last year
- Galaxy Docker Image with Tools for Genome Annotation☆12Apr 20, 2021Updated 5 years ago
- Emending Alignment of Spliced Transcript Reads☆13Jan 19, 2026Updated 8 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Pipeline to generate variant catalogues, a list of variants and their frequencies in a population, from whole genome sequences.☆14Oct 7, 2026Updated last week
- Nascent Transcription Processing Pipeline☆25Oct 7, 2026Updated last week
- Bayesian Markov Model motif discovery tool version 2 - An expectation maximization algorithm for the de novo discovery of enriched motifs…☆17Feb 1, 2021Updated 5 years ago
- nf-core/phyloplace is a bioinformatics best-practice analysis pipeline that performs phylogenetic placement with EPA-NG.☆12Oct 7, 2026Updated last week
- This repository contains the answers for coursera 's "Command Line Tools for Genomic Data Science"☆14Aug 6, 2023Updated 3 years ago
- Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines☆57Oct 5, 2026Updated last week
- ☆14Jul 30, 2026Updated 2 months ago
- Phyling: phylogenetic inference from annotated genomes☆34Oct 5, 2026Updated last week
- Raspir, the rare species identifier☆11Oct 19, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- JavaScript artefacts and deployment documents for JalviewJS☆16Jan 24, 2025Updated last year
- A program for assessing the T2T genome continuity and completeness☆98Sep 8, 2026Updated last month
- Benchmarking scripts for Gaia☆17Apr 10, 2025Updated last year
- ML phylogenetic inference for non-model organisms with short reads & assemblies☆15Oct 5, 2026Updated last week
- POC Nextflow pipeline to run the Chai-1, SOTA model for biomolecular structure prediction☆11Sep 29, 2026Updated 2 weeks ago
- ☆29Jul 16, 2022Updated 4 years ago
- Search for a set of compatible indexes for your sequencing experiment☆11Sep 6, 2019Updated 7 years ago