Generation and updating of protein families
☆23Sep 1, 2026Updated this week
Alternatives and similar repositories for proteinfamilies
Users that are interested in proteinfamilies are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pipeline for identifying, annotation, and quantifying phage sequences in (meta)-genomic sequences.☆19Jul 28, 2026Updated last month
- nf-test utility functions☆13Aug 28, 2026Updated last week
- ☆21Feb 15, 2025Updated last year
- ☆25Nov 14, 2025Updated 9 months ago
- A Nextflow pipeline that creates reliable, structure-informed MSAs of thousands of protein sequences which can supplement structural info…☆11Jul 14, 2026Updated last month
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- genome annotation (RNAseq and TE) pipeline (draft)☆13Apr 20, 2026Updated 4 months ago
- Protein 3D structure prediction pipeline☆112Updated this week
- Params validation plugin for Nextflow pipelines☆48Aug 7, 2024Updated 2 years ago
- Modular Genome Assembly, Annotation and Assessment Pipeline☆23Mar 16, 2026Updated 5 months ago
- Nail is an Alignment Inference tooL☆66Aug 22, 2026Updated last week
- Finding patch of conserved amino acid sites in 3D structure☆14Apr 13, 2025Updated last year
- FuncFetch workflow scripts☆15Jun 9, 2025Updated last year
- A nf-core pipeline for untargeted whole genome reconstruction with iSNV detection from metagenomic samples.☆40Updated this week
- Scripts to generate and analyze afdb clusters☆11Sep 15, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Parallelised and automated construction of metagenomic classifier databases of different tools☆22Updated this week
- lncRNA-Py is a development package for applying machine learning and deep learning to the problem of lncRNA classification, i.e. predicti…☆12Jan 24, 2025Updated last year
- CLI tool to verify workflow reproducibility☆17Jan 29, 2024Updated 2 years ago
- A pipeline to simulate sequencing reads, such as Amplicon, Target Capture, Metagenome, and Whole genome data.☆35Jul 28, 2026Updated last month
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- ESM-driven Pocket Cross Similarity☆18Aug 11, 2025Updated last year
- Assign genotypes to Salmonella Paratyphi A isolates using their whole-genome data.☆10Mar 6, 2025Updated last year
- Emending Alignment of Spliced Transcript Reads☆12Jan 19, 2026Updated 7 months ago
- Galaxy Docker Image with Tools for Genome Annotation☆12Apr 20, 2021Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Pipeline to generate variant catalogues, a list of variants and their frequencies in a population, from whole genome sequences.☆13Jul 28, 2026Updated last month
- Nascent Transcription Processing Pipeline☆25Updated this week
- Bayesian Markov Model motif discovery tool version 2 - An expectation maximization algorithm for the de novo discovery of enriched motifs…☆17Feb 1, 2021Updated 5 years ago
- nf-core/phyloplace is a bioinformatics best-practice analysis pipeline that performs phylogenetic placement with EPA-NG.☆12Updated this week
- This repository contains the answers for coursera 's "Command Line Tools for Genomic Data Science"☆14Aug 6, 2023Updated 3 years ago
- Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines☆57Aug 24, 2026Updated last week
- ☆15Jul 30, 2026Updated last month
- Phyling: phylogenetic inference from annotated genomes☆33Jul 27, 2026Updated last month
- Raspir, the rare species identifier☆11Oct 19, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- JavaScript artefacts and deployment documents for JalviewJS☆16Jan 24, 2025Updated last year
- A program for assessing the T2T genome continuity and completeness☆95Feb 28, 2026Updated 6 months ago
- Benchmarking scripts for Gaia☆17Apr 10, 2025Updated last year
- Embeddings for ontologies in the Description Logic EL++☆28Feb 2, 2023Updated 3 years ago
- ML phylogenetic inference for non-model organisms with short reads & assemblies☆15Jun 30, 2026Updated 2 months ago
- POC Nextflow pipeline to run the Chai-1, SOTA model for biomolecular structure prediction☆11Jul 21, 2026Updated last month
- ☆29Jul 16, 2022Updated 4 years ago