☆14Mar 16, 2024Updated 2 years ago
Alternatives and similar repositories for SpatialPPI
Users that are interested in SpatialPPI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- POC Nextflow pipeline to run the Chai-1, SOTA model for biomolecular structure prediction☆11Apr 16, 2026Updated 3 months ago
- Public repository for building and analyzing protein complex maps☆12Dec 6, 2016Updated 9 years ago
- Learning the language of protein-protein interactions☆150Jun 15, 2026Updated last month
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆14Jun 25, 2026Updated 3 weeks ago
- Code repository for the SPOC tool for scoring binary AF-M predicitons.☆15Apr 27, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Scoring methods for predicting the DDG upon protein mutation☆17Feb 20, 2023Updated 3 years ago
- Scripts to run AlphaFold3, Boltz-2, Chai-1, OpenFold3, Protenix & RF3 with MMseqs2 MSAs and custom templates.☆114Updated this week
- Pocket Detection part of "Drug The Whole Genome" project☆15Feb 3, 2026Updated 5 months ago
- Quantitative Estimate Index for Early-Stage Screening of Compounds Targeting Protein-Protein Interactions☆20Nov 28, 2023Updated 2 years ago
- A user-friendly library that brings familiar DataFrame-style operations to AnnData objects with a simple and expressive API.☆18Jul 13, 2026Updated last week
- Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"☆13Apr 2, 2023Updated 3 years ago
- ☆15Jun 12, 2026Updated last month
- Systematic Multi-Trait AAV Capsid Engineering for Efficient Gene Delivery (Eid et al., Nature Communications, 2024)☆13Aug 26, 2024Updated last year
- SpatialPPIv2: Enhancing protein–protein interaction prediction through graph neural networks with protein language models.☆28Jan 8, 2026Updated 6 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A command line application for downloading scientific papers.☆24Oct 29, 2025Updated 8 months ago
- ☆22May 31, 2023Updated 3 years ago
- Spreadsheet template files for 9x9 and 10x10 tube storage boxes for freezing biological samples☆14Apr 18, 2025Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Mar 22, 2024Updated 2 years ago
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆42Feb 9, 2022Updated 4 years ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆23Mar 6, 2025Updated last year
- ☆12Aug 28, 2024Updated last year
- A deep learning-based predictor of enzyme optimal pH☆12Jun 25, 2025Updated last year
- material for cheminfo tutorial☆13Oct 26, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- My work on building a deep neural network for fast and accurate protein protein interaction prediction☆11Mar 13, 2024Updated 2 years ago
- QC report generator for Hi-C pairs file☆13Sep 14, 2020Updated 5 years ago
- The full-length Homology-based R-gene Prediction (HRP) pipeline to comprehensively identify full-length NB-LRR gene models within genome …☆11Jul 27, 2023Updated 2 years ago
- ☆30Apr 30, 2026Updated 2 months ago
- In-house inpainting pipeline (Rfdiffusion>ProteinMPNN>AF2)☆17Oct 1, 2024Updated last year
- GPT-based protein language model for PTM site prediction☆19Aug 11, 2024Updated last year
- ☆23Apr 8, 2026Updated 3 months ago
- Resources for Generalisable Protein Complex Prediction☆20Oct 16, 2024Updated last year
- 使用PyQt5+FastAPI+SQLAlchemy+Redis+Celery做的一个登录注册页,使用邮箱注册与验证,前后分离,其中:QtLoginRegistrationClient仓库存放 GUI,QtLoginRegistrationServer仓库存放 API☆12Mar 25, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Fork of the KaKs_Calculator2.0 project https://sourceforge.net/projects/kakscalculator2☆14May 18, 2023Updated 3 years ago
- A bare-metal Python library for building and manipulating the molecular structures of proteins, nucleic acids, and small organic molecule…☆20Jun 9, 2026Updated last month
- Graphical Representation of Ancestral Sequence Predictions☆14Mar 6, 2023Updated 3 years ago
- ☆11Apr 20, 2018Updated 8 years ago
- Graph Network for protein-protein interface including language model features☆34Mar 26, 2024Updated 2 years ago
- 多平台多人协作文献管理软件。Multi-platform collaborative reference manager.☆12Dec 15, 2023Updated 2 years ago
- 将支付宝&微信个人账单转换为MoneyWiz兼容的csv文件(中文格式)的 Skill☆13Jul 11, 2026Updated last week