ohuelab / SpatialPPILinks
☆11Updated last year
Alternatives and similar repositories for SpatialPPI
Users that are interested in SpatialPPI are comparing it to the libraries listed below
Sorting:
- scripts and facilities for in-silico mutagenesis with FoldX☆65Updated 5 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- Evolutionary conservation estimation of residues or nucleotides☆56Updated 3 years ago
- ☆48Updated 2 weeks ago
- Graph Network for protein-protein interface including language model features☆34Updated last year
- GTalign, high-performance protein structure alignment, superposition and search☆52Updated 4 months ago
- A tool for protein and protein complex structure prediction.☆29Updated 6 months ago
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆39Updated last year
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 8 months ago
- Detection of remote homology by comparison of protein language model representations☆59Updated last year
- ☆22Updated last month
- ColabFold protocol☆57Updated last year
- ☆31Updated last year
- ☆46Updated last year
- Fast protein domain structure embedding+search tool☆27Updated 3 months ago
- Pipeline for protein-protein interaction prediction☆27Updated 3 years ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆43Updated 7 months ago
- ☆23Updated 2 years ago
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆28Updated 9 months ago
- Tools for annotation, processing and ML for antibody sequences☆35Updated this week
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated 2 years ago
- A domain parser for Alphafold models☆46Updated 2 years ago
- ☆85Updated last month
- ☆17Updated 2 years ago
- Feature map and function annotation of Proteins☆34Updated last year
- Automatic oligonucleotide design for PCR-based gene synthesis☆50Updated last month
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆76Updated 3 months ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆34Updated 3 years ago
- Learning the language of protein-protein interactions☆107Updated 3 months ago
- Machine learning prediction of enzyme optimum pH☆48Updated 7 months ago