Alternatives and similar repositories for SeqVerify

Users that are interested in SeqVerify are comparing it to the libraries listed below

• yhoogstrate / fastafs
  toolkit for file system virtualisation of random access compressed FASTA, FAI, DICT & TWOBIT files
  ☆22Updated last year
• noamteyssier / ggetrs
  Efficient querying of biological databases
  ☆42Updated last month
• biocommons / bioutils
  provides common tools and lookup tables used primarily by the hgvs and uta packages
  ☆24Updated 3 months ago
• beardymcjohnface / Nektool
  Cookiecutter profile for making a NextFlow-based bioinformatics tool
  ☆17Updated last year
• pierrepeterlongo / kmer2sequences
  Given a set of kmers (fasta format) and a set of sequences (fasta format), this tool will extract the sequences containing the kmers.
  ☆21Updated 2 years ago
• arewebioyet / arewebioyet.github.io
  Rust in bioinformatics and computational biology
  ☆19Updated 3 years ago
• jrderuiter / geneviz
  Library for visualising genomic features in Python.
  ☆15Updated 8 years ago
• COMBINE-lab / kmers
  A bit-packed k-mer representation (and relevant utilities) for rust
  ☆47Updated last year
• bioturing / hera-t
  Hera-T, a fast and accurate tool for estimating gene abundances in single cell data generated by the 10X-Chromium protocol
  ☆18Updated 4 years ago
• hammerlab / bai-indexer
  Build an index for your BAM Index (BAI)
  ☆17Updated 10 years ago
• pirl-unc / mhcgnomes
  Parsing MHC nomenclature in the wild
  ☆18Updated 8 months ago
• ArcInstitute / binseq
  A high efficiency binary format for sequencing data
  ☆84Updated this week
• jdidion / pairwise-alignment
  Catalogue of pairwise alignment algorithms and benchmarks
  ☆24Updated last year
• Singular-Genomics / singular-demux
  Singular Genomics Demultiplexing Tool
  ☆16Updated last year
• 10XGenomics / rust-pseudoaligner
  Single-Cell RNA-seq pseudo-aligner
  ☆52Updated last year
• conda-incubator / conda-env-builder
  Build and maintain multiple custom conda environments all in one place.
  ☆40Updated last year
• zaeleus / squab
  Alignment-based gene expression quantification
  ☆30Updated 3 months ago
• fedarko / strainFlye
  Pipeline for analyzing rare mutations in metagenome-assembled genomes
  ☆10Updated 8 months ago
• noamteyssier / paraseq
  A minimal copy fastq and fasta reader built for parallel support and paired end processing
  ☆38Updated this week
• vsbuffalo / hgindex
  Hierarchical binned indexed data store for on-disk genomic data.
  ☆13Updated 11 months ago
• nh13 / fqme
  ☆21Updated last year
• formbio / laava
  LAAVA: Long-read AAV Analysis
  ☆13Updated last week
• iqbal-lab-org / minos
  Variant call adjudication
  ☆16Updated last year
• sstadick / rumi
  Rust UMI Directional Adjacency Deduplicator
  ☆15Updated 6 years ago
• BUStools / BUS-format
  BUS format specification
  ☆13Updated 6 years ago
• COMBINE-lab / piscem-infer
  ☆14Updated 4 months ago
• zachcp / bioinformaticstoolkit
  Build and deploy cross platform bioinformatic utilities with Rust.
  ☆19Updated 8 months ago
• fulcrumgenomics / guide-counter
  A better, faster way to count guides in CRISPR screens.
  ☆34Updated 8 months ago
• Rbfinch / grepq
  quickly filter fastq files by matching sequences to a set of regex patterns
  ☆56Updated last week
• mkpython3 / Mutation-Simulator
  A tool for simulating random mutations in any genome
  ☆43Updated last year