CICAMS-Liu-lab / ECGEA
☆17Updated 4 years ago
Alternatives and similar repositories for ECGEA:
Users that are interested in ECGEA are comparing it to the libraries listed below
- ☆16Updated last year
- ☆16Updated last year
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆12Updated 2 years ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆19Updated 2 years ago
- ☆22Updated last year
- Deconvolution of spatial transcriptomics at single-cell resolution☆17Updated 5 months ago
- ☆13Updated 7 years ago
- code for data processing and visualisation associated with the stromal subclasses manuscript☆11Updated 4 years ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆13Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆23Updated 3 years ago
- R package of CSOmap(developing☆14Updated 2 years ago
- ☆31Updated 3 years ago
- ☆24Updated 3 years ago
- ☆17Updated 11 months ago
- ☆16Updated last year
- Lung cancer 10X analysis☆11Updated 4 years ago
- ☆37Updated 2 years ago
- Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.☆24Updated 8 months ago
- FitDevo: accurate inference of single-cell developmental potential using sample-specific gene weight☆15Updated 10 months ago
- Code used to process the data of the HBCA project☆25Updated last year
- Calculating Tumor microenvironment score☆28Updated 2 years ago
- ☆15Updated 8 months ago
- HCC single cell analysis for Alvarez, Benhammou et al.☆16Updated 2 years ago
- ☆13Updated last year
- ☆12Updated 10 months ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆29Updated 8 months ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.☆15Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆32Updated 4 years ago