CICAMS-Liu-lab / ECGEALinks
☆17Updated 4 years ago
Alternatives and similar repositories for ECGEA
Users that are interested in ECGEA are comparing it to the libraries listed below
Sorting:
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆14Updated 2 years ago
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆17Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆30Updated 3 years ago
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆10Updated last year
- Code used to process the data of the HBCA project☆32Updated last year
- R package of CSOmap(developing☆13Updated 3 years ago
- A record of the analysis pipelines used to create the HTAPP data☆34Updated 9 months ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆25Updated 3 years ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 2 years ago
- ☆37Updated 3 years ago
- ☆11Updated last year
- ☆17Updated 2 years ago
- ☆33Updated 4 years ago
- ☆22Updated 2 years ago
- ☆62Updated 2 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆36Updated 2 months ago
- Ordering gene-expression and functional events in single-cell experiments☆28Updated last year
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆38Updated 7 months ago
- Calculate cluster similarity between clusters from different single cell datasets/batches/samples.☆25Updated 8 months ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆20Updated last year
- ☆17Updated 2 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆30Updated 2 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- R tools for analysis and visualization of single-cell subclustering data☆17Updated 4 months ago
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆31Updated 4 months ago
- ☆12Updated 2 years ago
- Hierarchical Cell Annotation☆26Updated last year
- ☆15Updated 10 months ago
- ☆25Updated 2 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 5 years ago