☆18Feb 18, 2021Updated 5 years ago
Alternatives and similar repositories for ECGEA
Users that are interested in ECGEA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- We assembled a compendium dataset of mass-spectrometry-based proteomics data of 2002 primary tumors from 14 cancer types and 17 studies☆18Feb 4, 2022Updated 4 years ago
- ☆13Jan 24, 2024Updated 2 years ago
- Functional code templates for the Star Protocols paper describing consolidated WES variant calling with 3 callers☆10Oct 18, 2024Updated last year
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆14Nov 9, 2023Updated 2 years ago
- An R package to calculate Dynamical Network Biomarkers (DNB).☆10Sep 16, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- HCC single cell analysis for Alvarez, Benhammou et al.☆18Apr 30, 2022Updated 3 years ago
- Single Cell Oriented Reconstruction of PANDA-based Individually Optimized Networks☆27Mar 13, 2026Updated 2 weeks ago
- IAN: An Intelligent System for Omics Data Analysis and Discovery☆10Feb 23, 2026Updated last month
- Use batch balanced KNN (BBKNN) in R☆13Sep 9, 2025Updated 6 months ago
- ☆21Dec 23, 2024Updated last year
- ☆21May 6, 2025Updated 10 months ago
- Code and data from Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020)☆15Nov 5, 2020Updated 5 years ago
- This repository contains the code to run the ASCETS arm-level copy number events caller for targeted sequencing data. ASCETS produces arm…☆18Updated this week
- CellPolaris☆13Jan 11, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆11May 31, 2024Updated last year
- Repository for codes for the HBCA paper☆42Mar 17, 2023Updated 3 years ago
- Scripts from the GBM cellular states paper☆21Feb 24, 2021Updated 5 years ago
- ☆36Jun 4, 2024Updated last year
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆30Aug 8, 2023Updated 2 years ago
- ☆15Dec 29, 2025Updated 2 months ago
- Reproducibility Repo for mvTCR paper☆13Apr 2, 2024Updated last year
- ☆14Mar 28, 2025Updated 11 months ago
- curPrimers is a tool for trimming primer sequences from amplicon based NGS reads☆17May 26, 2025Updated 10 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Whole genome workflows☆13Nov 9, 2024Updated last year
- Scanner of specific spatial patterns in tissues☆14Jul 15, 2022Updated 3 years ago
- An Interactive Consensus Clustering framework for Cross-platform data analysis☆14Jan 28, 2022Updated 4 years ago
- Python package to generate high dimensional Flow Cytometry datasets using imputation by XGBoost regression☆12Sep 30, 2024Updated last year
- Unsupervised Inference of Developmental Directions for Single Cells☆23Jan 12, 2024Updated 2 years ago
- Multi-Omics integration and VIsualization in Cancer Subtyping☆146Jul 19, 2021Updated 4 years ago
- Basics of the OSCA book☆14Sep 29, 2025Updated 5 months ago
- Codes to regenerate figures for mutagen paper☆12Apr 8, 2021Updated 4 years ago
- call copy number from WES(WXS)☆11May 10, 2021Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆44Oct 27, 2018Updated 7 years ago
- Scripts used to generate the data/figures contained in "Single Cell Transcriptomics Reveals Cell Type Specific Diversification in Human H…☆13Mar 10, 2023Updated 3 years ago
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆19Dec 1, 2024Updated last year
- Systematic Multi-Trait AAV Capsid Engineering for Efficient Gene Delivery (Eid et al., Nature Communications, 2024)☆11Aug 26, 2024Updated last year
- Gene set enrichment analysis for single-cell RNAseq data☆31Feb 17, 2023Updated 3 years ago
- ☆63Dec 27, 2023Updated 2 years ago
- 🧬 Gene analysis toolkit based on R☆61Jan 6, 2025Updated last year