Single Cell Oriented Reconstruction of PANDA-based Individually Optimized Networks
☆28Oct 15, 2026Updated 2 weeks ago
Alternatives and similar repositories for SCORPION
Users that are interested in SCORPION are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Supplementary information for "Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcript…☆11Jan 15, 2024Updated 2 years ago
- Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing☆21Nov 18, 2025Updated 11 months ago
- ☆27Jul 9, 2025Updated last year
- A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…☆77Oct 16, 2025Updated last year
- Deconvolution of spatial transcriptomics at single-cell resolution☆23Mar 25, 2026Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆15Apr 12, 2023Updated 3 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆110Apr 16, 2026Updated 6 months ago
- MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance i…☆46Feb 20, 2025Updated last year
- Unsupervised Inference of Developmental Directions for Single Cells☆26Jan 12, 2024Updated 2 years ago
- ☆15Jan 24, 2024Updated 2 years ago
- R implementation of integration metrics for single-cell data☆14Sep 23, 2026Updated last month
- R and MATLAB scripts for MAGICAL☆11Jun 26, 2024Updated 2 years ago
- Single-Cell Inference of Class Switch Recombination☆25Jun 19, 2026Updated 4 months ago
- R package for analysing meaningful differences in the numbers of cell populations from single-cell phenotypic data☆25Oct 13, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆18Feb 18, 2021Updated 5 years ago
- ☆14Jul 28, 2026Updated 3 months ago
- ☆10Oct 29, 2024Updated 2 years ago
- ☆106May 4, 2026Updated 5 months ago
- The integration of single cell rank-based gene set enrichment analysis☆157Jan 14, 2026Updated 9 months ago
- A permutation-free framework for scalable, robust, and reference-based cell-cell communication analysis in single cell transcriptomics st…☆29May 23, 2026Updated 5 months ago
- ☆11Jul 8, 2024Updated 2 years ago
- ☆16Feb 28, 2025Updated last year
- Multi-slice Spatial Transcriptome Domain Analysis.☆12Dec 13, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆15May 3, 2026Updated 6 months ago
- BulkSignalR☆31Jun 23, 2026Updated 4 months ago
- twosigma☆10Jun 8, 2023Updated 3 years ago
- a scalable python suite for tree inference and advanced pseudotime analysis from scRNAseq data.☆75Jul 9, 2026Updated 3 months ago
- Learning meaningful representations of genes☆22Jul 7, 2025Updated last year
- ☆13Dec 14, 2023Updated 2 years ago
- An R package for visualising cell-cell interactions☆47Mar 16, 2026Updated 7 months ago
- Neighborhood Non-Negative Matrix Factorization☆11Sep 24, 2026Updated last month
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆15Nov 9, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Mar 4, 2025Updated last year
- Feature Selection in scRNA-seq☆11Sep 9, 2021Updated 5 years ago
- ☆91Jun 29, 2024Updated 2 years ago
- Identification of clone-specific and cancer-selective multi-targeting therapeutic options based on single-cell transcriptomic profiles of…☆25Feb 20, 2025Updated last year
- Python package to find communication-driven intercellular flows from single-cell RNA-sequencing and spatial transcriptomics data.☆93Mar 19, 2026Updated 7 months ago
- mcRigor: a statistical method to enhance the rigor of metacell partitioning in single-cell data analysis☆17Apr 8, 2026Updated 6 months ago
- Pathway-Level Single-Cell Functional Profiling of Individual Patient Samples☆11Aug 6, 2025Updated last year