Teichlab / PanGIAtlasLinks
Integration of gut cell atlases
☆28Updated 8 months ago
Alternatives and similar repositories for PanGIAtlas
Users that are interested in PanGIAtlas are comparing it to the libraries listed below
Sorting:
- Aligning gene expression trajectories of single-cell reference and query systems☆76Updated 2 months ago
- ☆12Updated last year
- ☆28Updated last week
- Method for de novo mutation calling from droplet based single cell RNA seq data☆14Updated 4 years ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆31Updated 3 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 4 years ago
- ☆23Updated 2 years ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆43Updated 2 years ago
- ☆54Updated last year
- ☆31Updated 3 years ago
- Spatial transcriptomics of heart tissue☆25Updated 3 years ago
- ☆51Updated last year
- Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…☆52Updated 4 years ago
- ☆37Updated 3 years ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆23Updated last year
- R package for pathway analysis in scRNA-seq data☆75Updated last year
- HCC single cell analysis for Alvarez, Benhammou et al.☆17Updated 3 years ago
- Code used to process the data of the HBCA project☆32Updated last year
- Robust identification of perturbed cell types in single-cell RNA-seq data☆34Updated 11 months ago
- Codes for the scPLC project☆69Updated 2 years ago
- ☆59Updated last year
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 10 months ago
- ☆31Updated last year
- Functions for single cell data analysis☆32Updated 4 years ago
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆28Updated last year
- ☆47Updated 3 years ago
- Accurate and fast cell marker gene identification with COSG☆51Updated last week
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆28Updated 4 years ago
- Draw phylogenetic trees of tumor evolution☆86Updated 2 years ago
- ☆40Updated 2 years ago