whwanglab / PDACLinks
☆13Updated 3 years ago
Alternatives and similar repositories for PDAC
Users that are interested in PDAC are comparing it to the libraries listed below
Sorting:
- single cell analysis of treatment naive and treated human PDAC☆24Updated 3 years ago
- ☆13Updated last year
- ☆20Updated 6 months ago
- ☆21Updated 8 months ago
- Code for spatial subclone paper☆13Updated 7 months ago
- Custom codes accompanying single cell spatial transcriptomic study on the healthy human lung☆12Updated last year
- ☆17Updated last year
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆29Updated 2 years ago
- UHCA☆11Updated 7 months ago
- Code used to process the data of the HBCA project☆32Updated last year
- Containerized cancer subtype prediction tools for gene expression, miRNA, DNA methylation, somatic mutations and copy number variation.☆27Updated 5 months ago
- Scanner of specific spatial patterns in tissues☆13Updated 3 years ago
- Methods for visualization and analysis of spatially-resolved gene expression☆21Updated last month
- Scripts from the GBM cellular states paper☆19Updated 4 years ago
- ☆20Updated 2 months ago
- R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA…☆13Updated 11 months ago
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 7 months ago
- Hotspot cluster distance analysis in spatial transcriptomic data☆29Updated 7 months ago
- Computational pipeline to process EasySci-RNA data.☆21Updated last year
- ☆13Updated last year
- This repository contains the scripts developed for the analysis of CRC samples processed with the 10x VISIUM Spatial Transcriptomics tech…☆11Updated 2 years ago
- Spatial One☆28Updated 10 months ago
- A computational tool for identification of 3D multi-modal spatial neighborhoods☆13Updated last month
- ☆26Updated 3 years ago
- ☆30Updated 4 months ago
- A record of the analysis pipelines used to create the HTAPP data☆33Updated 5 months ago
- STHD: probabilistic cell typing of Single spots in whole Transcriptome spatial data with High Definition☆28Updated 4 months ago
- ☆19Updated 5 months ago
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆17Updated last year
- ☆22Updated 2 years ago