R script to make Manhattan-style plot for TWAS
☆43Aug 15, 2021Updated 4 years ago
Alternatives and similar repositories for TWAS-plotter
Users that are interested in TWAS-plotter are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R script for generating functionally informed genetic risk scores from TWAS☆11Jul 20, 2023Updated 3 years ago
- Tool for predicting TWAS features (e.g. gene expression) in a target sample☆17Jun 24, 2025Updated last year
- This is a pipeline for calculating weights for TWAS☆35Aug 3, 2022Updated 4 years ago
- R script that performs gene-set or gene property analysis using TWAS results.☆34Apr 10, 2026Updated 4 months ago
- Transcriptome-wide association study of Major Depressive Disorder☆12Sep 17, 2020Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Genotype-based Prediction (GenoPred)☆78Jun 24, 2026Updated last month
- Create Regional Association Plots☆13May 27, 2026Updated 2 months ago
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Mar 24, 2023Updated 3 years ago
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- ☆26Jan 8, 2026Updated 7 months ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Jun 27, 2023Updated 3 years ago
- Workflow for performing cistrome-wide associations studies☆11Jul 25, 2022Updated 4 years ago
- ☆21Nov 15, 2024Updated last year
- A collection of various utilities for GWAS summary statistics☆35May 14, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆30Aug 2, 2022Updated 4 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆29Jul 30, 2025Updated last year
- Pleiotropy-informed conditional and conjunctional false discovery rate☆39Jun 3, 2025Updated last year
- Python script for multivariate GWAS meta-analysis☆25Dec 6, 2024Updated last year
- ☆11Jan 30, 2025Updated last year
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆41Feb 8, 2025Updated last year
- ☆15Apr 20, 2021Updated 5 years ago
- ☆56Jan 16, 2025Updated last year
- A powerful TWAS framework leveraging summary-level reference data☆35Apr 1, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆27Aug 20, 2020Updated 5 years ago
- ☆20Sep 20, 2021Updated 4 years ago
- ☆31Oct 18, 2021Updated 4 years ago
- ☆20Aug 7, 2025Updated last year
- Leveraging functional information to improve GWAS summary statistic imputation☆21Aug 10, 2021Updated 5 years ago
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆20Mar 30, 2021Updated 5 years ago
- Estimate genetic correlation using predicted expression☆28Mar 8, 2018Updated 8 years ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆21Aug 19, 2025Updated 11 months ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆44Sep 18, 2025Updated 10 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Software to infer latent pleiotropic components from GWAS summary data☆17Jan 30, 2025Updated last year
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Oct 6, 2023Updated 2 years ago
- lhcMR☆26Mar 24, 2024Updated 2 years ago
- Visualization of Colocalization Between eQTL and GWAS Data☆90May 13, 2022Updated 4 years ago
- Pair-wise conditional analysis and colocalisation☆43May 2, 2024Updated 2 years ago
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆14Mar 16, 2026Updated 4 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆43May 2, 2018Updated 8 years ago