Pleiotropy-informed conditional and conjunctional false discovery rate
☆38Jun 3, 2025Updated 11 months ago
Alternatives and similar repositories for pleiofdr
Users that are interested in pleiofdr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A collection of various utilities for GWAS summary statistics☆33May 14, 2024Updated last year
- ☆21Sep 12, 2025Updated 7 months ago
- Partitioning algorithm developed for LAVA☆17May 17, 2024Updated last year
- ☆83Nov 9, 2025Updated 5 months ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Jun 27, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- cfdr.pleio is an R package implementing conditional and conjunctional false discovery rates for studying pleiotropic gene variants betwee…☆18Feb 9, 2023Updated 3 years ago
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Mar 24, 2023Updated 3 years ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Oct 6, 2023Updated 2 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆28Jul 30, 2025Updated 9 months ago
- Workflow for performing cistrome-wide associations studies☆11Jul 25, 2022Updated 3 years ago
- Convert GWAS sumstat files into a common format with a common reference for positions, rsids and effect alleles.☆24Sep 4, 2025Updated 7 months ago
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- Pair-wise conditional analysis and colocalisation☆42May 2, 2024Updated 2 years ago
- ☆19Aug 7, 2025Updated 8 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆40Sep 18, 2025Updated 7 months ago
- Multivariate Omnibus Statistical Test☆23Jul 2, 2024Updated last year
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆59Feb 12, 2021Updated 5 years ago
- An R package for generating comparative regional association plots☆18Sep 30, 2025Updated 7 months ago
- ☆25Jan 8, 2026Updated 3 months ago
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆14Mar 16, 2026Updated last month
- MR-link-2: pleiotropy robust cis MR☆23Aug 4, 2025Updated 8 months ago
- A powerful TWAS framework leveraging summary-level reference data☆33Apr 1, 2025Updated last year
- R script to make Manhattan-style plot for TWAS☆41Aug 15, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆15Apr 20, 2021Updated 5 years ago
- Software to infer latent pleiotropic components from GWAS summary data☆16Jan 30, 2025Updated last year
- Python script for multivariate GWAS meta-analysis☆25Dec 6, 2024Updated last year
- R-package for structural equation modeling based on GWAS summary data☆275Apr 3, 2026Updated last month
- Hypothesis Prioritisation in multi-trait Colocalization☆56Apr 8, 2024Updated 2 years ago
- Fine-mapping method only using summary statistics☆20Mar 23, 2016Updated 10 years ago
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆14Jan 31, 2024Updated 2 years ago
- Leveraging functional information to improve GWAS summary statistic imputation☆20Aug 10, 2021Updated 4 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42May 2, 2018Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- FLAMES: Accurate gene prioritization in GWAS loci☆59Dec 16, 2025Updated 4 months ago
- Estimate genetic correlation using predicted expression☆25Mar 8, 2018Updated 8 years ago
- Code to reproduce analysis and figures for 'Genetic mapping of etiologic brain cell types for obesity' (Timshel, eLife 2020)☆14May 20, 2021Updated 4 years ago
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆19Mar 30, 2021Updated 5 years ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆46Mar 16, 2026Updated last month
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆55Dec 19, 2023Updated 2 years ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆35Sep 26, 2024Updated last year