jinghuazhao / pQTLtoolsLinks
https://jinghuazhao.github.io/pQTLtools/
☆22Updated 7 months ago
Alternatives and similar repositories for pQTLtools
Users that are interested in pQTLtools are comparing it to the libraries listed below
Sorting:
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Updated 4 years ago
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆37Updated 8 months ago
- ☆12Updated last month
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆18Updated 4 years ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆30Updated last week
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated 2 years ago
- Create Regional Association Plots☆12Updated last month
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆20Updated 2 weeks ago
- Pipeline that runs two-sample Mendelian randomization on molecular QTLs and GWAS loci and tests for horizontal pleiotropy.☆26Updated last year
- ☆13Updated 3 years ago
- ☆32Updated 4 months ago
- SCALLOP-INF analysis☆20Updated last week
- Tissue-Gene Fine-Mapping☆25Updated 7 months ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Updated 2 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Updated 4 months ago
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆34Updated 3 months ago
- GWAS genetics Fine-mapping method☆26Updated last year
- Integration of TWAS and Colocalization Analysis☆17Updated last year
- FLAMES: Accurate gene prioritization in GWAS loci☆50Updated 7 months ago
- Transcriptome-wide association study of Major Depressive Disorder☆12Updated 5 years ago
- MR-link-2: pleiotropy robust cis MR☆20Updated 2 months ago
- Connecting GWAS summary data to analytical tools☆22Updated last year
- ☆21Updated last year
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆27Updated 3 months ago
- ☆20Updated last month
- Workflow for performing cistrome-wide associations studies☆10Updated 3 years ago
- ☆30Updated 4 years ago
- Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper☆18Updated last year
- ☆13Updated last year
- GENI plots to visualise results from genome-wide association studies☆30Updated last year