pjnewcombe / R2BGLiMS
R wrapper for a Java Bayesian GLM variable selection package
☆16Updated 5 years ago
Alternatives and similar repositories for R2BGLiMS:
Users that are interested in R2BGLiMS are comparing it to the libraries listed below
- Older repo for MRLocus. See new website for software usage guide:☆15Updated last year
- ☆17Updated 3 years ago
- Sample code for ldsc analyses in UKBB☆30Updated last year
- Learn and validate subtypes from multiple traits☆20Updated 3 years ago
- Implementation of LTFH++☆11Updated 9 months ago
- Scripts used for generating Neale Lab UKB results☆19Updated 2 years ago
- Primo☆16Updated 3 years ago
- Tissue of ACTion scores for Investigating Complex trait-Associated Loci☆13Updated 4 years ago
- Total and allele specific read based cis-QTL, fine-mapping, and prediction☆9Updated 4 years ago
- Fine-mapping method only using summary statistics☆18Updated 9 years ago
- Data and code for the Effector index☆13Updated 4 years ago
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆19Updated 3 years ago
- Stratified squared trans-ethnic genetic correlation☆12Updated 2 years ago
- Create LocusZoom-style plots in R.☆21Updated 2 years ago
- genetic correlation between phenotypes in the UK biobank☆12Updated last year
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆13Updated 2 years ago
- A rapido and lightweight method for PGS computation☆13Updated last month
- DENTIST (Detecting Errors iN analyses of summary staTISTics) is a QC tool for summary-data-based analyses.☆24Updated last year
- Adding random effects model to the METAL software☆13Updated last year
- ☆11Updated 2 years ago
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆19Updated last year
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆24Updated last year
- Colocalisation pipeline for Open Targets Genetics☆17Updated 2 years ago
- An R package for generating comparative regional association plots☆18Updated 3 months ago
- Post variant-calling QC pipeline for orienting cohort data with a reference file. Additional steps for merging and phasing with a referen…☆10Updated 5 years ago
- ☆10Updated 4 years ago
- Code for implementing Mendelian randomization investigations☆16Updated 9 years ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated 9 months ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 5 months ago
- software package for integrative genetic association analysis☆34Updated last year