dongjunchung / GPALinks
GPA: Genetic analysis incorporating Pleiotropy and Annotation
☆15Updated 5 years ago
Alternatives and similar repositories for GPA
Users that are interested in GPA are comparing it to the libraries listed below
Sorting:
- Fine-mapping method only using summary statistics☆20Updated 9 years ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆31Updated last year
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆36Updated last month
- GWAS for survival analysis in large cohorts☆22Updated last year
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆41Updated 7 years ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆26Updated 4 years ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆36Updated last year
- Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper☆18Updated last year
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Updated 4 years ago
- Regional association plots☆25Updated last year
- GENI plots to visualise results from genome-wide association studies☆30Updated last year
- ☆19Updated 2 months ago
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆37Updated 8 months ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆30Updated this week
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆56Updated 4 years ago
- Polynomial Mendelian randomization for the inference of non-linear causal effects☆13Updated 2 years ago
- FLAMES: Accurate gene prioritization in GWAS loci☆50Updated 7 months ago
- ☆11Updated 3 years ago
- ☆30Updated 4 years ago
- ☆37Updated 4 years ago
- ☆35Updated 2 years ago
- Estimate genetic correlation using predicted expression☆23Updated 7 years ago
- ☆20Updated 2 months ago
- Regional association plots☆26Updated last year
- R package that contains plink binaries for windows, mac and linux☆13Updated 6 years ago
- R script that performs gene-set or gene property analysis using TWAS results.☆32Updated last year
- Hypothesis Prioritisation in multi-trait Colocalization☆55Updated last year
- FOCUS: Fine-mapping Of CaUsal gene Sets☆46Updated 2 years ago
- A collection of various utilities for GWAS summary statistics☆32Updated last year
- Integration of TWAS and Colocalization Analysis☆17Updated last year