dongjunchung / GPALinks
GPA: Genetic analysis incorporating Pleiotropy and Annotation
☆15Updated 5 years ago
Alternatives and similar repositories for GPA
Users that are interested in GPA are comparing it to the libraries listed below
Sorting:
- GWAS for survival analysis in large cohorts☆22Updated last year
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Updated 3 years ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆31Updated last year
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆30Updated last week
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆36Updated last year
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆26Updated 4 years ago
- Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper☆18Updated last year
- Fine-mapping method only using summary statistics☆20Updated 9 years ago
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆37Updated 8 months ago
- GENI plots to visualise results from genome-wide association studies☆30Updated 11 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆41Updated 7 years ago
- Regional association plots☆25Updated last year
- ☆20Updated 2 months ago
- ☆13Updated 3 years ago
- Estimate genetic correlation using predicted expression☆22Updated 7 years ago
- ☆21Updated last year
- FLAMES: Accurate gene prioritization in GWAS loci☆45Updated 7 months ago
- Integration of TWAS and Colocalization Analysis☆17Updated 11 months ago
- ☆19Updated 2 months ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆36Updated 3 weeks ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Updated 2 years ago
- Polynomial Mendelian randomization for the inference of non-linear causal effects☆13Updated 2 years ago
- Connecting GWAS summary data to analytical tools☆21Updated last year
- Hypothesis Prioritisation in multi-trait Colocalization☆54Updated last year
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆56Updated 4 years ago
- Regional association plots☆26Updated last year
- Colocalization analysis of genetic association signals☆54Updated 3 months ago
- ☆37Updated 4 years ago
- BWMR (Bayesian Weighted Mendelian Randomization)☆19Updated 2 years ago
- ☆35Updated 2 years ago