☆22Feb 19, 2020Updated 6 years ago
Alternatives and similar repositories for DeepType
Users that are interested in DeepType are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- DeepG4: A deep learning approach to predict active G-quadruplexes☆14May 31, 2022Updated 3 years ago
- Scripts used for "Comparing transcriptional dynamics of the epithelial-mesenchymal transition"☆18Aug 1, 2023Updated 2 years ago
- ☆16Jun 5, 2022Updated 3 years ago
- Core code for the paper "A deep learning model for drug response prediction from cancer genomic signatures and compound chemical structur…☆22Sep 21, 2021Updated 4 years ago
- ☆25Feb 18, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- single nuclei RNA-seq analysis toolbox☆10Oct 26, 2016Updated 9 years ago
- A barcode demultiplexer for Oxford Nanopore long-read amplicon sequencing data☆10Nov 27, 2024Updated last year
- GESTALT processing pipeline for barcodes captured with single-cell RNA sequencing☆13Jan 26, 2020Updated 6 years ago
- Gene-based test of allele-specific expression without requiring haplotype information☆16Mar 20, 2018Updated 8 years ago
- Extended ComplexHeatmap☆11Jan 5, 2025Updated last year
- An alignment-free approach to estimating exon-inclusion ratios without a reference transcriptome☆10Jan 25, 2019Updated 7 years ago
- A R library of pseudo-random number generators written in C++☆13Apr 17, 2026Updated 2 weeks ago
- Semi-parametric simulation of bulk and single cell RNA-seq data☆10Nov 17, 2024Updated last year
- R codes and supporting files for an introductory level course on computational biology.☆13Jun 18, 2020Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆13Mar 20, 2021Updated 5 years ago
- scripts for analyzing data of macrophage development in human☆10Dec 8, 2019Updated 6 years ago
- SAME (Single-cell RNA-seq Aggregated clustering via Mixture model Ensemble): Cluster ensemble for single-cell RNA-seq data☆16May 4, 2021Updated 4 years ago
- 3DGB is a workflow to build 3D models of genomes from HiC data☆13Jan 26, 2026Updated 3 months ago
- ChIP-seq peak calling with GC effects adjustment☆10Jul 5, 2018Updated 7 years ago
- IAN: An Intelligent System for Omics Data Analysis and Discovery☆10Feb 23, 2026Updated 2 months ago
- Optimizing weighted gene co-expression network analysis (WGCNA, an R package) with a multi-threaded calculation of the Topological Overla…☆12Jan 5, 2022Updated 4 years ago
- Calculate DNA methylation age using Horvath 2013 method☆11Aug 25, 2017Updated 8 years ago
- Audit Rust Dependencies using the RustSec Advisory DB☆18Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆16Nov 3, 2023Updated 2 years ago
- SAFE (Single-cell Aggregated clustering From Ensemble): Cluster ensemble for single-cell RNA-seq data☆19Mar 27, 2021Updated 5 years ago
- Rheumatoid Arthritis project. single cell RNA sequencing data.☆15May 31, 2021Updated 4 years ago
- Code to reproduce analyses and figures for Kamath et al., 2022☆13May 5, 2022Updated 3 years ago
- ☆11Jun 10, 2024Updated last year
- weighted indexes for clustering evaluation☆14Apr 18, 2020Updated 6 years ago
- Supplementary material for the article "Combining Static and Dynamic Features for Multivariate Sequence Classification"☆11Aug 1, 2016Updated 9 years ago
- ☆12Feb 16, 2025Updated last year
- bioinformatics R test code☆14Mar 29, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- GOAT: efficient and robust identification of gene set enrichment☆14Jan 24, 2026Updated 3 months ago
- A computation framework designed to detect differential junctions usage between two groups at single cell level☆13Feb 1, 2021Updated 5 years ago
- Multi-omics integration method using AE and GCN☆39Jun 7, 2023Updated 2 years ago
- reverse gene expression score☆16Sep 8, 2023Updated 2 years ago
- Automated ingestion and conversion of various single-cell data formats, within and across species☆13Jan 26, 2026Updated 3 months ago
- ☆12Jan 15, 2017Updated 9 years ago
- ☆11Mar 1, 2025Updated last year