linnarsson-lab / adult-human-brainView external linksLinks
Cytograph version used for adult human-brain analysis
☆96Jan 13, 2026Updated last month
Alternatives and similar repositories for adult-human-brain
Users that are interested in adult-human-brain are comparing it to the libraries listed below
Sorting:
- ☆15Feb 21, 2023Updated 2 years ago
- ☆37Oct 24, 2025Updated 3 months ago
- ☆13Sep 3, 2025Updated 5 months ago
- Algorithms for single-cell analysis☆29Jul 19, 2021Updated 4 years ago
- Analysis pipeline for the adolescent mouse nervous system project☆24Jun 28, 2018Updated 7 years ago
- Reproducibility repository for the Human Neural Organoid Atlas publication☆43Dec 16, 2024Updated last year
- Acquiring images from allen brain atlas, mouse ISH experiments in R.☆17Mar 20, 2024Updated last year
- single-cell decorrelated module networks☆30Aug 24, 2024Updated last year
- scDoRI (single-cell Deep multi-Omic Regulatory Inference) is a deep learning model to infer enhancer-mediated gene regulatory networks (e…☆29Aug 20, 2025Updated 5 months ago
- The scripts used for analyzing JAX mouse dataset☆27Oct 24, 2024Updated last year
- Trends in single cell papers☆17Sep 23, 2024Updated last year
- Perform differential expression analysis on multi-sample single cell datasets using linear mixed models☆29Feb 2, 2026Updated 2 weeks ago
- ☆22Feb 7, 2020Updated 6 years ago
- ☆29Jul 25, 2024Updated last year
- A public clone of the HypoMap Figure & analysis repository.☆11Sep 26, 2022Updated 3 years ago
- ☆12Jun 6, 2024Updated last year
- ☆10Feb 3, 2022Updated 4 years ago
- Code repository for TCAT analyses☆14Sep 26, 2025Updated 4 months ago
- Toolkit for metacell analysis☆23Aug 8, 2024Updated last year
- A Bayesian model for compositional single-cell data analysis☆188Jan 13, 2026Updated last month
- Code used to analyze single cell RNA and ATAC sequencing in developing human brain☆35Jan 4, 2022Updated 4 years ago
- Spatial analysis of FISH data☆34May 20, 2025Updated 8 months ago
- An R-based interface for loom files☆67Jul 9, 2020Updated 5 years ago
- Python playground for cell-type-specific biology☆12Jan 20, 2026Updated 3 weeks ago
- Common Factor Integration & Transfer learning (cFIT) for single cell RNA-seq data☆11Jul 6, 2021Updated 4 years ago
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated last year
- Camiel's scATAC-seq analysis pipeline☆13Apr 15, 2024Updated last year
- ☆11Oct 4, 2021Updated 4 years ago
- Conversion between scRNA-seq objects☆198Jan 12, 2026Updated last month
- 10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC☆25Jul 15, 2022Updated 3 years ago
- Analysis for BICCN cross-species primary motor cortex project☆23Feb 13, 2024Updated 2 years ago
- End-to-end analysis of spatial multi-omics data☆102Jan 26, 2026Updated 3 weeks ago
- Data and analysis scripts for our Embryo Timecourse paper.☆68Dec 16, 2019Updated 6 years ago
- Hierarchical, iterative clustering for analysis of transcriptomics data in R☆119Aug 20, 2025Updated 5 months ago
- Methods to discover gene programs on single-cell data☆173Sep 26, 2025Updated 4 months ago
- ☆16Sep 8, 2024Updated last year
- ☆13Nov 3, 2023Updated 2 years ago
- ☆48Mar 1, 2018Updated 7 years ago
- GIANT (Gene-based data Integration and ANalysis Technique) is a method for large-scale joint analyses of atlas-level single cell data.☆14Jun 13, 2023Updated 2 years ago