CNRGH / crimmixLinks
☆17Updated 5 years ago
Alternatives and similar repositories for crimmix
Users that are interested in crimmix are comparing it to the libraries listed below
Sorting:
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆18Updated 5 years ago
- Code to reproduce TNBC analysis and figures☆24Updated 3 years ago
- ☆20Updated 4 years ago
- ☆31Updated 3 years ago
- Immune evasion before tumor invasion in early squamous lung cell carcinogenesis☆16Updated 3 years ago
- Calculating Tumor microenvironment score☆29Updated 2 years ago
- TIDE (Tumor Immune Dysfunction and Exclusion), a gene expression biomarker to predict the clinical response to immune checkpoint blockade…☆35Updated 2 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 3 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- Robustness and applicability of transcription factor and pathway analysis tools on single-cell RNA-seq data☆27Updated 5 years ago
- Dichotomous of innate immune landscape☆17Updated 5 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 3 years ago
- Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers☆20Updated 2 years ago
- ☆9Updated 3 weeks ago
- Hypoxia associated molecular feature analysis☆35Updated 5 years ago
- Data-driven Network-based Bayesian Inference of Drivers☆43Updated last week
- ☆47Updated 5 years ago
- ☆20Updated 4 years ago
- Repository for codes for the HBCA paper☆36Updated 2 years ago
- Tumor Immune Single-cell Hub☆21Updated 4 years ago
- ☆56Updated last year
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- An R package for classification of immune subtypes, in cancer, using gene expression data.☆46Updated 6 months ago
- Analysis notebooks and data for AML hierarchies paper☆16Updated 2 years ago
- Transcriptomic tools to classify bladder tumours according to six published molecular classifications : Baylor, UNC, MDA, Lund, CIT-Curie…☆27Updated 2 years ago
- ☆47Updated last year
- ☆13Updated 7 years ago
- TIDE (Tumor Immune Dysfunction and Exclusion), a gene expression biomarker to predict the clinical response to immune checkpoint blockade…☆30Updated 5 years ago
- Predictive models and analysis of cancer prognosis and drug response using primary tumor microbial abundances derived from WGS and RNA-se…☆17Updated 8 months ago
- ☆29Updated 7 years ago