YuanTian1991 / ChAMPLinks
☆25Updated 2 years ago
Alternatives and similar repositories for ChAMP
Users that are interested in ChAMP are comparing it to the libraries listed below
Sorting:
- ☆20Updated 4 years ago
- ☆30Updated 3 years ago
- Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.☆57Updated 3 months ago
- Code repository for single cell RNA-seq☆35Updated 4 years ago
- Hypoxia associated molecular feature analysis☆35Updated 5 years ago
- codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data☆19Updated 4 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated last month
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆45Updated last year
- Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment☆27Updated 2 years ago
- Repository for Cibersortx☆59Updated 4 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- ☆34Updated 10 months ago
- Comprehensive tutorial for differential methylation analysis, differential variability analysis and integrative analysis☆27Updated last year
- ☆47Updated 2 weeks ago
- ☆47Updated last year
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆47Updated 10 months ago
- Enrichment Networks for Pathway Enrichment Analysis☆52Updated 2 years ago
- Multiscale embedded gene co-expression network analysis☆51Updated last year
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆77Updated 2 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆37Updated last year
- Processing scripts for single cell DNA sequencing on the Tapestri platform☆24Updated 2 years ago
- ☆31Updated last year
- Calculating Tumor microenvironment score☆29Updated 2 years ago
- Single cell RNA analysis about paper “Caloric restriction reprograms the single-cell transcriptional landscape of Rattus norvegicus aging…☆29Updated 5 years ago
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆74Updated last month
- TIDE (Tumor Immune Dysfunction and Exclusion), a gene expression biomarker to predict the clinical response to immune checkpoint blockade…☆30Updated 5 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆33Updated this week
- identifying disease critical cell types and programs from single cell RNAseq☆56Updated 3 years ago
- A R package for advanced single cell data viz☆67Updated last year
- Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer☆76Updated last year