YuanTian1991 / ChAMPLinks
☆25Updated 2 years ago
Alternatives and similar repositories for ChAMP
Users that are interested in ChAMP are comparing it to the libraries listed below
Sorting:
- ☆48Updated 2 months ago
- ☆20Updated 4 years ago
- Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.☆59Updated 5 months ago
- Repository for Cibersortx☆61Updated 4 years ago
- Hypoxia associated molecular feature analysis☆35Updated 5 years ago
- Enrichment Networks for Pathway Enrichment Analysis☆56Updated 2 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆114Updated 3 weeks ago
- Predictive models and analysis of cancer prognosis and drug response using primary tumor microbial abundances derived from WGS and RNA-se…☆17Updated 8 months ago
- Multiscale embedded gene co-expression network analysis☆54Updated last year
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆18Updated 6 years ago
- ☆32Updated 3 years ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆95Updated 10 months ago
- Homologous recombination deficiency in TCGA PanCancer Atlas☆28Updated 4 years ago
- ☆48Updated 5 years ago
- ☆40Updated last year
- ☆23Updated 2 months ago
- Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer☆78Updated last year
- Easily download publicly available GWAS summary statistics.☆76Updated last year
- Code repository for single cell RNA-seq☆36Updated 4 years ago
- GLASS consortium☆39Updated 5 years ago
- Source code of FUMA GWAS web application☆57Updated last year
- This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representin…☆53Updated last week
- Transcriptomics Visualization R package.☆73Updated 3 months ago
- Pan-cancer mycobiome atlas☆27Updated 2 years ago
- Differential Gene Correlation Analysis☆45Updated last year
- R package (compatible with SCope) to create generic .loom files and extend them with other data e.g.: SCENIC regulons, Seurat clusters an…☆42Updated 3 years ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆79Updated 3 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- Comprehensive tutorial for differential methylation analysis, differential variability analysis and integrative analysis☆28Updated last year
- ☆86Updated last year